Miyakogusa Predicted Gene
- Lj3g3v2741930.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr3
- Results of Blast2 searches (The best-hits are tabulated.):
database |
Accession |
Score |
Iden (%) |
Posi (%) |
Definition |
TrEMBL |
I1J7U6_SOYBN |
273 |
69.2 |
78.3 |
(tr|I1J7U6) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
TAIR_pep |
AT3G56830.1 |
160 |
51.7 |
61.9 |
| Symbols: | Protein of unknown function (DUF565) | chr3:21042755-21043840 REVERSE LENGTH=230 |
Medicago |
Medtr4g025400.1 |
265 |
70.7 |
80.6 |
| ycf20-like protein | HC | chr4:8599913-8595683 | 20130731 |
Soybean |
Glyma01g33620.1 |
273 |
69.2 |
78.3 |
|
LJGI |
gnl|LJGI|FS329541 |
1116 |
100.0 |
100.0 |
similar to UniRef100_A7PYD5 Cluster: Chromosome chr15 scaffold_37, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr15 scaffold_37, whole genome shotgun sequence - Vitis vinifera (Grape), partial (36%) |
- A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v2741930.1 |
length: 198 aa. |
IPR007572 |
Uncharacterised protein family Ycf20 |
method |
AccNumber |
shortName |
E-value |
location |
HMMPfam |
PF04483 |
DUF565 |
1.7e-16 |
139-197 |
no_ID |
|
Seg |
seg |
seg |
NA |
73-86 |
- Wolf-PSORT
Lj3g3v2741930.1 chlo 7, plas 4, E.R. 2, nucl_plas 2, golg_plas 2, cysk_plas 2, mito_plas 2, cyto_plas 2
- PTS1 (Peroxisome targeting signal type 1)
entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
Lj3g3v2741930.1 |
|