Miyakogusa Predicted Gene
- Lj3g3v2737500.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr3
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1L8R7_SOYBN |
106 |
53.0 |
64.3 |
(tr|I1L8R7) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT5G02880.1 |
86.7 |
47.5 |
61.6 |
| Symbols: UPL4 | ubiquitin-protein ligase 4 | chr5:662643-668847 FORWARD LENGTH=1502 |
| Medicago |
Medtr1g066940.8 |
107 |
55.8 |
68.3 |
| E3 ubiquitin-protein ligase | HC | chr1:28781572-28771167 | 20130731 |
| Soybean |
Glyma10g05620.2 |
106 |
53.0 |
64.3 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj3g3v2737500.1 |
length: 228 aa. |
| IPR000569 |
HECT |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0004842 |
ubiquitin-protein ligase activity |
|
|
| Cellular Component |
GO:0005622 |
intracellular |
|
|
| Biological Process |
GO:0006464 |
cellular protein modification process |
|
|
| HMMPfam |
PF00632 |
HECT |
2.7e-13 |
106-209 |
| ProfileScan |
PS50237 |
HECT |
11.445 |
127-174 |
| superfamily |
SSF56204 |
Hect, |
1.1e-06 |
127-176 |
| no_ID |
|
| HMMPanther |
PTHR11254 |
HECT |
1.3e-17 |
127-222 |
| HMMPanther |
PTHR11254:SF73 |
HECT |
1.3e-17 |
127-222 |
| Seg |
seg |
seg |
NA |
33-45 |
- Wolf-PSORT
Lj3g3v2737500.1 nucl 6, cyto 5, cysk 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj3g3v2737500.1 |
|