Miyakogusa Predicted Gene

Lj3g3v2737470.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL B9RDA1_RICCO 920 87.5 92.5 (tr|B9RDA1) Transketolase, putative OS=Ricinus communis GN=RCOM_1611360 PE=4 SV=1
TAIR_pep AT2G45290.1 880 83.2 89.5 | Symbols: | Transketolase | chr2:18672737-18675589 FORWARD LENGTH=741
Medicago Medtr4g024630.1 917 88.5 92.7 | plastid transketolase | HC | chr4:8338986-8333916 | 20130731
Soybean Glyma03g03200.1 957 92.5 94.5  
LJGI gnl|LJGI|TC77557 2882 99.9 99.9 homologue to UniRef100_A7QGQ5 Cluster: Chromosome chr16 scaffold_94, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr16 scaffold_94, whole genome shotgun sequence - Vitis vinifera (Grape), partial (78%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v2737470.1 length: 505 aa.
IPR005474 Transketolase, N-terminal
method AccNumber shortName E-value location
HMMPfam PF00456 Transketolase_N 1.3e-62 1-178
IPR005475 Transketolase-like, pyrimidine-binding domain
HMMPfam PF02779 Transket_pyr 3.5e-43 196-366
HMMSmart SM00861 Transketolase, 1.9e-59 195-367
IPR005476 Transketolase, C-terminal
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0008152 metabolic process    
HMMPfam PF02780 Transketolase_C 2.6e-10 390-497
IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0008152 metabolic process    
superfamily SSF52922 TK 7.3e-47 369-504
IPR015941 Transketolase-like, C-terminal
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0008152 metabolic process    
Gene3D G3DSA:3.40.50.920 no description 2.4e-46 378-505
IPR020826 Transketolase binding site
PatternScan PS00802 TRANSKETOLASE_2 NA 309-325
no_ID  
Coil coil coiled-coil NA 148-169
Gene3D G3DSA:3.40.50.970 no description 3.8e-72 1-164
174-373
HMMPanther PTHR11624 DEHYDROGENASE 2.1e-275 1-505
HMMPanther PTHR11624:SF1 TRANSKETOLASE 2.1e-275 1-505
Seg seg seg NA 153-170
superfamily SSF52518 Thiamin 5.2e-51 173-369
1-178
Wolf-PSORT
Lj3g3v2737470.1	cyto 9, chlo 2, cysk 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v2737470.1