Miyakogusa Predicted Gene
- Lj3g3v2735140.2
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr3
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
K7K3T6_SOYBN |
241 |
83.0 |
85.7 |
(tr|K7K3T6) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT1G02010.2 |
204 |
69.9 |
78.1 |
| Symbols: SEC1A | secretory 1A | chr1:348046-352197 FORWARD LENGTH=660 |
| Medicago |
Medtr4g023610.1 |
215 |
74.3 |
79.7 |
| Sec1-family transporter | HC | chr4:8008899-8000116 | 20130731 |
| Soybean |
Glyma01g34340.1 |
242 |
83.0 |
85.7 |
|
| LJGI |
gnl|LJGI|TC80561 |
54.0 |
88.2 |
88.2 |
similar to UniRef100_Q9C5X3 Cluster: SNARE-interacting protein KEULE; n=1; Arabidopsis thaliana|Rep: SNARE-interacting protein KEULE - Arabidopsis thaliana (Mouse-ear cress), partial (40%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj3g3v2735140.2 |
length: 146 aa. |
| IPR001619 |
Sec1-like protein |
| method |
AccNumber |
shortName |
E-value |
location |
| Biological Process |
GO:0006904 |
vesicle docking involved in exocytosis |
|
|
| Biological Process |
GO:0016192 |
vesicle-mediated transport |
|
|
| HMMPanther |
PTHR11679 |
VESICLE |
3e-77 |
1-146 |
| HMMPfam |
PF00995 |
Sec1 |
2.5e-22 |
1-134 |
| superfamily |
SSF56815 |
Sec1/munc18-like |
1.7e-22 |
1-134 |
| no_ID |
|
| Gene3D |
G3DSA:1.25.40.60 |
no description |
1.4e-13 |
41-141 |
| Gene3D |
G3DSA:3.90.830.10 |
no description |
5e-08 |
1-40 |
| HMMPanther |
PTHR11679:SF5 |
PLANT |
3e-77 |
1-146 |
| Seg |
seg |
seg |
NA |
116-131 |
- Wolf-PSORT
Lj3g3v2735140.2 nucl 5, cyto 2, plas 2, cysk 2, cysk_plas 2, cyto_plas 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj3g3v2735140.2 |
|