Miyakogusa Predicted Gene

Lj3g3v2735120.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7JDE1_MEDTR 1174 83.6 92.5 (tr|G7JDE1) ATP-dependent DNA helicase 2 subunit OS=Medicago truncatula GN=MTR_4g023560 PE=4 SV=1
TAIR_pep AT1G48050.1 843 59.2 76.9 | Symbols: KU80, ATKU80 | Ku80 family protein | chr1:17723498-17726859 FORWARD LENGTH=680
Medicago Medtr4g023560.1 1174 83.6 92.5 | ATP-dependent DNA helicase 2 subunit Ku80 | HC | chr4:7973007-7979747 | 20130731
Soybean Glyma05g25550.1 1143 82.1 89.8  
LJGI gnl|LJGI|TC57722 2133 100.0 100.0 similar to UniRef100_Q8S563 Cluster: KAP-2; n=1; Medicago truncatula|Rep: KAP-2 - Medicago truncatula (Barrel medic), partial (52%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v2735120.1 length: 680 aa.
IPR002035 von Willebrand factor, type A
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:3.40.50.410 no description 4.4e-61 1-227
IPR005160 Ku70/Ku80 C-terminal arm
Molecular Function GO:0003677 DNA binding    
Molecular Function GO:0004003 ATP-dependent DNA helicase activity    
Biological Process GO:0006303 double-strand break repair via nonhomologous end joining    
Gene3D G3DSA:1.10.1600.10 no description 2e-22 423-518
HMMPfam PF03730 Ku_C 1.1e-12 451-534
IPR005161 Ku70/Ku80, N-terminal alpha/beta
HMMPfam PF03731 Ku_N 1e-27 7-163
IPR006164 Ku70/Ku80 beta-barrel domain
Molecular Function GO:0003677 DNA binding    
Biological Process GO:0006303 double-strand break repair via nonhomologous end joining    
HMMPfam PF02735 Ku 8.3e-40 224-431
HMMSmart SM00559 Ku70 1.6e-38 278-419
IPR014893 Ku, C-terminal
Molecular Function GO:0016817 hydrolase activity, acting on acid anhydrides    
Gene3D G3DSA:1.25.40.240 no description 5.3e-48 538-679
HMMPfam PF08785 Ku_PK_bind 1.1e-45 557-679
superfamily SSF101420 C-terminal 1.5e-46 513-680
IPR016194 SPOC like C-terminal domain
Gene3D G3DSA:2.40.290.10 no description 9.4e-62 228-418
superfamily SSF100939 SPOC 2.3e-85 214-519
IPR024193 Ku80
Biological Process GO:0000723 telomere maintenance    
Molecular Function GO:0003677 DNA binding    
Molecular Function GO:0003684 damaged DNA binding    
Cellular Component GO:0005634 nucleus    
Biological Process GO:0006303 double-strand break repair via nonhomologous end joining    
Biological Process GO:0006310 DNA recombination    
Molecular Function GO:0042162 telomeric DNA binding    
Cellular Component GO:0043564 Ku70:Ku80 complex    
HMMPanther PTHR12604:SF3 KU 1.1e-159 4-679
no_ID  
HMMPanther PTHR12604 KU 1.1e-159 4-679
superfamily SSF53300 vWA-like 3.1e-35 4-241
Wolf-PSORT
Lj3g3v2735120.1	cyto 7, chlo 6
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v2735120.1