Miyakogusa Predicted Gene

Lj3g3v2722600.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7KCC8_SOYBN 655 73.2 81.5 (tr|K7KCC8) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT2G45540.1 469 55.5 70.9 | Symbols: | WD-40 repeat family protein / beige-related | chr2:18757881-18772229 REVERSE LENGTH=2946
Medicago Medtr8g035750.1 630 72.6 79.9 | WD-40 repeat protein/beige protein | HC | chr8:13037122-13066469 | 20130731
Soybean Glyma07g09140.1 214 77.4 85.5  
LJGI gnl|LJGI|DC596208 280 84.3 84.3 similar to UniRef100_A7PY22 Cluster: Chromosome chr15 scaffold_37, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr15 scaffold_37, whole genome shotgun sequence - Vitis vinifera (Grape), partial (5%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v2722600.2 length: 438 aa.
IPR001680 WD40 repeat
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00400 WD40 0.011 155-185
232-259
HMMSmart SM00320 WD40 5.3 147-186
229-268
393-433
ProfileScan PS50082 WD_REPEATS_2 12.280 154-189
IPR015943 WD40/YVTN repeat-like-containing domain
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:2.130.10.10 no description 4e-29 383-432
IPR017986 WD40-repeat-containing domain
Molecular Function GO:0005515 protein binding    
ProfileScan PS50294 WD_REPEATS_REGION 12.025 127-195
superfamily SSF50978 WD40 2.3e-24 85-433
no_ID  
HMMPanther PTHR13743 BEIGE/BEACH-RELATED 7.4e-145 11-438
HMMPanther PTHR13743:SF36 PREDICTED: 7.4e-145 11-438
Seg seg seg NA 189-217
265-278
Wolf-PSORT
Lj3g3v2722600.2	cyto 5, chlo 3, cyto_plas 3, nucl 2, mito 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v2722600.2