Miyakogusa Predicted Gene

Lj3g3v2720280.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7LCR3_MEDTR 270 69.7 74.6 (tr|G7LCR3) Extended synaptotagmin-3 OS=Medicago truncatula GN=MTR_8g035590 PE=4 SV=1
TAIR_pep AT3G61050.2 236 59.7 70.1 | Symbols: NTMC2TYPE4, NTMC2T4 | Calcium-dependent lipid-binding (CaLB domain) family protein | chr3:22597485-22600932 FORWARD LENGTH=510
Medicago Medtr8g035590.1 270 69.7 74.6 | calcium-dependent lipid-binding (CaLB domain) family protein | HC | chr8:12977502-12966437 | 20130731
Soybean Glyma18g45720.1 264 66.2 73.1  
LJGI gnl|LJGI|TC71313 107 80.7 80.7 similar to UniRef100_A7PY44 Cluster: Chromosome chr15 scaffold_37, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr15 scaffold_37, whole genome shotgun sequence - Vitis vinifera (Grape), partial (14%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v2720280.1 length: 294 aa.
IPR000008 C2 calcium-dependent membrane targeting
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00168 C2 4.9e-22 42-121
HMMSmart SM00239 Protein 9.7e-21 41-138
IPR008973 C2 calcium/lipid-binding domain, CaLB
Molecular Function GO:0005515 protein binding    
superfamily SSF49562 C2 4.6e-29 31-173
IPR018029 C2 membrane targeting protein
ProfileScan PS50004 C2 15.844 27-123
IPR020477 C2 domain
FPrintScan PR00360 C2DOMAIN 1.1e-05 57-69
82-95
104-112
no_ID  
Coil coil coiled-coil NA 167-188
Gene3D G3DSA:2.60.40.150 no description 4.9e-27 37-163
HMMPanther PTHR10774 EXTENDED 3.6e-59 1-203
HMMPanther PTHR10774:SF2 C2 3.6e-59 1-203
Seg seg seg NA 139-156
170-193
202-259
267-278
Wolf-PSORT
Lj3g3v2720280.1	cyto 8.5, cyto_E.R. 5.5, chlo 4
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v2720280.1