Miyakogusa Predicted Gene
- Lj3g3v2720130.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr3
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1KIK7_SOYBN |
285 |
78.9 |
88.9 |
(tr|I1KIK7) Uncharacterized protein OS=Glycine max PE=3 SV=1 |
| TAIR_pep |
AT5G51810.1 |
163 |
56.5 |
70.7 |
| Symbols: GA20OX2, AT2353, ATGA20OX2 | gibberellin 20 oxidase 2 | chr5:21055389-21056746 REVERSE LENGTH=378 |
| Medicago |
Medtr8g033380.1 |
256 |
72.4 |
83.5 |
| gibberellin 20-oxidase | HC | chr8:12874562-12871549 | 20130731 |
| Soybean |
Glyma07g08950.1 |
285 |
78.9 |
88.9 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj3g3v2720130.1 |
length: 170 aa. |
| IPR026992 |
Non-haem dioxygenase N-terminal domain |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF14226 |
DIOX_N |
5.2e-27 |
55-160 |
| IPR027443 |
Isopenicillin N synthase-like |
| Gene3D |
G3DSA:2.60.120.330 |
no description |
3.2e-32 |
27-159 |
| no_ID |
|
| HMMPanther |
PTHR10209 |
OXIDOREDUCTASE, |
8.3e-36 |
18-168 |
| HMMPanther |
PTHR10209:SF55 |
OXIDOREDUCTASE, |
8.3e-36 |
18-168 |
| superfamily |
SSF51197 |
Clavaminate |
1e-32 |
18-170 |
- Wolf-PSORT
Lj3g3v2720130.1 nucl 6.5, cyto_nucl 5, chlo 3, cyto 2.5, extr 1, cysk 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj3g3v2720130.1 |
|