Miyakogusa Predicted Gene

Lj3g3v2720020.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL C0JP16_LOTJA 744 86.2 86.2 (tr|C0JP16) Putative basic helix-loop-helix protein BHLH11 OS=Lotus japonicus PE=4 SV=1
TAIR_pep AT3G21330.1 212 48.9 61.8 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | chr3:7507720-7508841 FORWARD LENGTH=373
Medicago Medtr8g015450.2 349 50.1 58.6 | transcription factor | HC | chr8:5042676-5040349 | 20130731
Soybean Glyma13g42900.1 310 57.5 63.1  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v2720020.1 length: 428 aa.
IPR011598 Myc-type, basic helix-loop-helix (bHLH) domain
method AccNumber shortName E-value location
Molecular Function GO:0046983 protein dimerization activity    
Gene3D G3DSA:4.10.280.10 no description 8.4e-11 332-382
HMMPfam PF00010 HLH 1e-05 333-373
HMMSmart SM00353 helix 1.8e-12 330-379
ProfileScan PS50888 BHLH 14.888 324-373
superfamily SSF47459 HLH, 5.7e-13 334-406
no_ID  
Coil coil coiled-coil NA 363-384
HMMPanther PTHR12565 STEROL 5.2e-19 332-382
Seg seg seg NA 22-28
70-78
85-96
175-193
334-345
Wolf-PSORT
Lj3g3v2720020.1	nucl 14
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v2720020.1