Miyakogusa Predicted Gene
- Lj3g3v2718790.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr3
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
K7M944_SOYBN |
580 |
54.5 |
69.7 |
(tr|K7M944) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT3G18150.1 |
68.2 |
28.7 |
45.1 |
| Symbols: | RNI-like superfamily protein | chr3:6217929-6219500 FORWARD LENGTH=456 |
| Medicago |
Medtr2g100570.1 |
498 |
47.8 |
63.1 |
| F-box/FBD-like domain protein | LC | chr2:43232493-43235537 | 20130731 |
| Soybean |
Glyma15g02580.1 |
389 |
50.2 |
63.1 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj3g3v2718790.1 |
length: 616 aa. |
| IPR001810 |
F-box domain, cyclin-like |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0005515 |
protein binding |
|
|
| superfamily |
SSF81383 |
F-box |
6.2e-09 |
88-133 |
| no_ID |
|
| Gene3D |
G3DSA:3.80.10.10 |
no description |
1.6e-20 |
206-408 |
| HMMPanther |
PTHR32212 |
FAMILY |
8.2e-17 |
71-258 |
| superfamily |
SSF52058 |
L |
6.5e-11 |
207-458 |
- Wolf-PSORT
Lj3g3v2718790.1 nucl 8, mito 2.5, cyto_mito 2, plas 1.5, golg_plas 1.5
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj3g3v2718790.1 |
|