Miyakogusa Predicted Gene

Lj3g3v2704600.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1KGF2_SOYBN 819 78.5 83.1 (tr|I1KGF2) Ubiquitin carboxyl-terminal hydrolase OS=Glycine max PE=3 SV=1
TAIR_pep AT1G51710.1 683 65.6 74.2 | Symbols: UBP6, ATUBP6 | ubiquitin-specific protease 6 | chr1:19175805-19179894 REVERSE LENGTH=482
Medicago Medtr8g015660.1 822 78.9 82.5 | ubiquitin carboxyl-terminal hydrolase | HC | chr8:5156920-5167537 | 20130731
Soybean Glyma07g01480.1 819 78.5 83.1  
LJGI gnl|LJGI|TC71365 1108 100.0 100.0 similar to UniRef100_A7P6U4 Cluster: Ubiquitin carboxyl-terminal hydrolase; n=1; Vitis vinifera|Rep: Ubiquitin carboxyl-terminal hydrolase - Vitis vinifera (Grape), partial (39%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v2704600.1 length: 509 aa.
IPR000626 Ubiquitin
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00240 ubiquitin 2.4e-07 16-71
HMMSmart SM00213 Ubiquitin 3.5e-11 2-73
IPR001394 Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2
Molecular Function GO:0004221 ubiquitin thiolesterase activity    
Biological Process GO:0006511 ubiquitin-dependent protein catabolic process    
HMMPfam PF00443 UCH 2.7e-55 103-502
ProfileScan PS50235 UCH_2_3 24.379 104-506
IPR018200 Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site
Molecular Function GO:0004221 ubiquitin thiolesterase activity    
Biological Process GO:0006511 ubiquitin-dependent protein catabolic process    
PatternScan PS00972 UCH_2_1 NA 105-120
PatternScan PS00973 UCH_2_2 NA 440-458
IPR019954 Ubiquitin conserved site
PatternScan PS00299 UBIQUITIN_1 NA 28-53
IPR019955 Ubiquitin supergroup
ProfileScan PS50053 UBIQUITIN_2 12.640 2-71
no_ID  
Gene3D G3DSA:3.10.20.90 no description 3e-28 1-79
HMMPanther PTHR24006 FAMILY 6.6e-204 1-509
HMMPanther PTHR24006:SF121UBIQUITIN CARBOXYL-TERMINAL 6.6e-204 1-509
Seg seg seg NA 203-215
241-254
357-369
411-425
superfamily SSF54001 Cysteine 2.3e-81 100-505
superfamily SSF54236 Ubiquitin-like 1.3e-24 2-91
Wolf-PSORT
Lj3g3v2704600.1	cyto 9, nucl 4
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v2704600.1