Miyakogusa Predicted Gene

Lj3g3v2693530.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G8A2V0_MEDTR 1254 77.2 86.2 (tr|G8A2V0) Multidrug resistance protein ABC transporter family OS=Medicago truncatula GN=MTR_138s0049 PE=3 SV=1
TAIR_pep AT3G21250.2 885 57.4 71.7 | Symbols: MRP6, ABCC8 | multidrug resistance-associated protein 6 | chr3:7457668-7463261 REVERSE LENGTH=1464
Medicago Medtr8g015980.1 1256 77.2 86.2 | ABC transporter-like family-protein | HC | chr8:5293135-5286501 | 20130731
Soybean Glyma08g20770.1 1190 78.6 86.6  
LJGI gnl|LJGI|AV781263 369 98.5 98.5 weakly similar to UniRef100_A7P6T7 Cluster: Chromosome chr9 scaffold_7, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr9 scaffold_7, whole genome shotgun sequence - Vitis vinifera (Grape), partial (4%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v2693530.1 length: 814 aa.
IPR001140 ABC transporter, transmembrane domain
method AccNumber shortName E-value location
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006810 transport    
Cellular Component GO:0016021 integral to membrane    
Molecular Function GO:0042626 ATPase activity, coupled to transmembrane movement of substances    
Biological Process GO:0055085 transmembrane transport    
HMMPfam PF00664 ABC_membrane 7e-31 280-539
IPR003439 ABC transporter-like
Molecular Function GO:0005524 ATP binding    
Molecular Function GO:0016887 ATPase activity    
HMMPfam PF00005 ABC_tran 2.2e-15 637-747
ProfileScan PS50893 ABC_TRANSPORTER_2 17.621 595-806
IPR003593 AAA+ ATPase domain
Molecular Function GO:0000166 nucleotide binding    
Molecular Function GO:0017111 nucleoside-triphosphatase activity    
HMMSmart SM00382 ATPases 4.8e-13 622-800
IPR011527 ABC transporter, transmembrane domain, type 1
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006810 transport    
Cellular Component GO:0016021 integral to membrane    
Molecular Function GO:0042626 ATPase activity, coupled to transmembrane movement of substances    
Biological Process GO:0055085 transmembrane transport    
superfamily SSF90123 ABC 3.3e-35 268-577
IPR017871 ABC transporter, conserved site
Molecular Function GO:0005524 ATP binding    
Molecular Function GO:0016887 ATPase activity    
PatternScan PS00211 ABC_TRANSPORTER_1 NA 720-734
IPR017940 ABC transporter, integral membrane type 1
ProfileScan PS50929 ABC_TM1F 33.824 280-561
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 8.6e-42 595-790
no_ID  
Gene3D G3DSA:1.20.1560.10 no description 1.6e-24 268-576
Gene3D G3DSA:3.40.50.300 no description 1.1e-54 596-790
HMMPanther PTHR24223 FAMILY 0 26-790
HMMPanther PTHR24223:SF108MULTIDRUG RESISTANCE-ASSOCIATED 0 26-790
Seg seg seg NA 45-58
405-428
Wolf-PSORT
Lj3g3v2693530.1	plas 7, vacu 2, E.R. 2, E.R._vacu 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v2693530.1