Miyakogusa Predicted Gene

Lj3g3v2693310.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3S8G5_MEDTR 440 82.0 86.5 (tr|I3S8G5) Uncharacterized protein OS=Medicago truncatula PE=2 SV=1
TAIR_pep AT3G13700.2 312 58.1 68.0 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family protein | chr3:4490859-4492632 REVERSE LENGTH=287
Medicago Medtr8g016140.1 440 82.0 86.5 | small nuclear ribonucleoprotein | HC | chr8:5394401-5388873 | 20130731
Soybean Glyma08g20730.2 430 80.5 83.5  
LJGI gnl|LJGI|TC73082 1592 99.9 99.9 similar to UniRef100_A7P6T3 Cluster: Chromosome chr9 scaffold_7, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr9 scaffold_7, whole genome shotgun sequence - Vitis vinifera (Grape), partial (81%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v2693310.1 length: 267 aa.
IPR000504 RNA recognition motif domain
method AccNumber shortName E-value location
Molecular Function GO:0003676 nucleic acid binding    
HMMPfam PF00076 RRM_1 1.3e-09 23-86
187-249
HMMSmart SM00360 RNA 1.7e-07 22-93
186-258
ProfileScan PS50102 RRM 11.554 21-100
185-262
IPR012677 Nucleotide-binding, alpha-beta plait
Molecular Function GO:0000166 nucleotide binding    
Gene3D G3DSA:3.30.70.330 no description 7.5e-16 14-99
180-262
no_ID  
HMMPanther PTHR12742 RNA-BINDING 2.9e-55 16-219
Seg seg seg NA 128-146
superfamily SSF54928 RNA-binding 1.6e-20 19-244
Wolf-PSORT
Lj3g3v2693310.1	nucl 14
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v2693310.1