Miyakogusa Predicted Gene

Lj3g3v2693000.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7KYY5_SOYBN 972 80.8 90.0 (tr|K7KYY5) Uncharacterized protein OS=Glycine max PE=3 SV=1
TAIR_pep AT1G72970.1 796 70.8 82.1 | Symbols: HTH, EDA17 | Glucose-methanol-choline (GMC) oxidoreductase family protein | chr1:27452872-27455706 FORWARD LENGTH=594
Medicago Medtr8g016320.1 956 79.6 88.6 | glucose-methanol-choline (GMC) oxidoreductase family protein | HC | chr8:5498531-5505390 | 20130731
Soybean Glyma13g42630.1 957 79.4 87.7  
LJGI gnl|LJGI|TC70415 948 98.6 98.6 similar to UniRef100_A7P6R5 Cluster: Chromosome chr9 scaffold_7, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr9 scaffold_7, whole genome shotgun sequence - Vitis vinifera (Grape), partial (21%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v2693000.1 length: 589 aa.
IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal
method AccNumber shortName E-value location
Molecular Function GO:0016614 oxidoreductase activity, acting on CH-OH group of donors    
Molecular Function GO:0050660 flavin adenine dinucleotide binding    
Biological Process GO:0055114 oxidation-reduction process    
HMMPfam PF00732 GMC_oxred_N 3.7e-31 58-330
PatternScan PS00624 GMC_OXRED_2 NA 289-303
IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal
Molecular Function GO:0016614 oxidoreductase activity, acting on CH-OH group of donors    
Biological Process GO:0055114 oxidation-reduction process    
HMMPfam PF05199 GMC_oxred_C 2.4e-26 428-572
IPR012132 Glucose-methanol-choline oxidoreductase
Biological Process GO:0006066 alcohol metabolic process    
Molecular Function GO:0008812 choline dehydrogenase activity    
Molecular Function GO:0016614 oxidoreductase activity, acting on CH-OH group of donors    
Molecular Function GO:0050660 flavin adenine dinucleotide binding    
Biological Process GO:0055114 oxidation-reduction process    
HMMPIR PIRSF000137 Alcohol 7e-114 17-586
no_ID  
Gene3D G3DSA:3.30.560.10 no description 2.5e-11 410-525
Gene3D G3DSA:3.50.50.60 no description 1.7e-76 526-581
HMMPanther PTHR11552 GLUCOSE-METHANOL-CHOLINE 1.7e-240 55-589
HMMPanther PTHR11552:SF14 SUBFAMILY 1.7e-240 55-589
Seg seg seg NA 36-53
superfamily SSF51905 FAD/NAD(P)-binding 1.7e-49 54-583
superfamily SSF54373 FAD-linked 2.1e-37 325-528
Wolf-PSORT
Lj3g3v2693000.1	plas 4, cyto 3, E.R._plas 3, chlo 2, E.R. 2, nucl_plas 2, golg_plas 2, cyto_pero 2, mito_plas 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v2693000.1