Miyakogusa Predicted Gene

Lj3g3v2692910.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr3

Full length sequence(45610869 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL I3S7J7_LOTJA 195 100.0 100.0 (tr|I3S7J7) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1

TAIR_pep AT1G55080.1 133 63.9 83.5 | Symbols: MED9 | MED9; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G29580.1); Has 67203 Blast hits to 25757 proteins in 1293 species: Archae - 12; Bacteria - 4374; Metazoa - 24340; Fungi - 7940; Plants - 5927; Viruses - 273; Other Eukaryotes - 24337 (source: NCBI BLink). | chr1:20553121-20554174 REVERSE LENGTH=244

Medicago Medtr8g017180.1 171 88.5 94.8 | mediator of RNA polymerase II transcription subunit-like protein, putative | HC | chr8:5777388-5772992 | 20130731

Soybean Glyma07g01150.1 173 88.5 95.8

LJGI gnl|LJGI|TC79997 591 99.7 99.7 similar to UniRef100_A7P6S1 Cluster: Chromosome chr9 scaffold_7, whole genome shotgun sequence; n=2; Vitis vinifera|Rep: Chromosome chr9 scaffold_7, whole genome shotgun sequence - Vitis vinifera (Grape), partial (79%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj3g3v2692910.1 length: 191 aa.

no_ID

method AccNumber shortName E-value location

Coil coil coiled-coil NA 68-89

Seg seg seg NA 15-32
33-91

Wolf-PSORT

Lj3g3v2692910.1 nucl 10, chlo 1, cyto 1, plas 1, extr 1, cyto_plas 1

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj3g3v2692910.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	I3S7J7_LOTJA	195	100.0	100.0	(tr\|I3S7J7) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep	AT1G55080.1	133	63.9	83.5	\| Symbols: MED9 \| MED9; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G29580.1); Has 67203 Blast hits to 25757 proteins in 1293 species: Archae - 12; Bacteria - 4374; Metazoa - 24340; Fungi - 7940; Plants - 5927; Viruses - 273; Other Eukaryotes - 24337 (source: NCBI BLink). \| chr1:20553121-20554174 REVERSE LENGTH=244
Medicago	Medtr8g017180.1	171	88.5	94.8	\| mediator of RNA polymerase II transcription subunit-like protein, putative \| HC \| chr8:5777388-5772992 \| 20130731
Soybean	Glyma07g01150.1	173	88.5	95.8
LJGI	gnl\|LJGI\|TC79997	591	99.7	99.7	similar to UniRef100_A7P6S1 Cluster: Chromosome chr9 scaffold_7, whole genome shotgun sequence; n=2; Vitis vinifera\|Rep: Chromosome chr9 scaffold_7, whole genome shotgun sequence - Vitis vinifera (Grape), partial (79%)

no_ID
Lj3g3v2692910.1				length: 191 aa.
method	AccNumber	shortName	E-value	location
Coil	coil	coiled-coil	NA	68-89
Seg	seg	seg	NA	15-32 33-91