Miyakogusa Predicted Gene
- Lj3g3v2691860.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr3
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1MCZ9_SOYBN |
954 |
81.3 |
90.8 |
(tr|I1MCZ9) Uncharacterized protein OS=Glycine max PE=3 SV=1 |
| TAIR_pep |
AT3G13790.1 |
753 |
66.7 |
79.1 |
| Symbols: ATCWINV1, ATBFRUCT1 | Glycosyl hydrolases family 32 protein | chr3:4533084-4535831 REVERSE LENGTH=584 |
| Medicago |
Medtr8g017410.1 |
962 |
81.1 |
90.7 |
| cell-wall invertase | HC | chr8:5901126-5905686 | 20130731 |
| Soybean |
Glyma15g02850.1 |
954 |
81.3 |
90.8 |
|
| LJGI |
gnl|LJGI|TC77116 |
1955 |
98.3 |
98.3 |
similar to UniRef100_Q2HVE4 Cluster: Sialidase; n=1; Medicago truncatula|Rep: Sialidase - Medicago truncatula (Barrel medic), partial (62%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj3g3v2691860.1 |
length: 558 aa. |
| IPR001362 |
Glycoside hydrolase, family 32 |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0004553 |
hydrolase activity, hydrolyzing O-glycosyl compounds |
|
|
| Biological Process |
GO:0005975 |
carbohydrate metabolic process |
|
|
| HMMSmart |
SM00640 |
Glycosyl |
1e-245 |
50-528 |
| IPR008985 |
Concanavalin A-like lectin/glucanases superfamily |
| superfamily |
SSF49899 |
Concanavalin |
7.8e-33 |
372-554 |
| IPR013148 |
Glycosyl hydrolase family 32, N-terminal |
| HMMPfam |
PF00251 |
Glyco_hydro_32N |
8.6e-118 |
50-372 |
| IPR013189 |
Glycosyl hydrolase family 32, C-terminal |
| Gene3D |
G3DSA:2.60.120.560 |
no description |
4.2e-58 |
420-556 |
| HMMPfam |
PF08244 |
Glyco_hydro_32C |
1e-19 |
443-528 |
| IPR018053 |
Glycoside hydrolase, family 32, active site |
| Molecular Function |
GO:0004553 |
hydrolase activity, hydrolyzing O-glycosyl compounds |
|
|
| Biological Process |
GO:0005975 |
carbohydrate metabolic process |
|
|
| PatternScan |
PS00609 |
GLYCOSYL_HYDROL_F32 |
NA |
50-63 |
| IPR023296 |
Glycosyl hydrolase, five-bladed beta-propellor domain |
| Gene3D |
G3DSA:2.115.10.20 |
no description |
6.4e-11 |
40-225 |
| superfamily |
SSF75005 |
Arabinanase/levansucrase/invertase |
1.2e-105 |
39-373 |
| no_ID |
|
| HMMPanther |
PTHR31953 |
FAMILY |
6.2e-281 |
8-558 |
| HMMPanther |
PTHR31953:SF0 |
SUBFAMILY |
6.2e-281 |
8-558 |
- Wolf-PSORT
Lj3g3v2691860.1 vacu 3, E.R. 3, E.R._vacu 3, chlo 2, E.R._plas 2, cyto_E.R. 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj3g3v2691860.1 |
|