Miyakogusa Predicted Gene

Lj3g3v2666490.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
TrEMBL G7LI80_MEDTR 1015 52.8 67.3 (tr|G7LI80) Nbs-lrr resistance protein OS=Medicago truncatula GN=MTR_8g018260 PE=4 SV=1
TAIR_pep AT5G17680.1 468 36.6 55.9 | Symbols: | disease resistance protein (TIR-NBS-LRR class), putative | chr5:5822999-5827153 FORWARD LENGTH=1294
Medicago Medtr8g017800.1 1032 53.2 67.5 | disease resistance protein (TIR-NBS-LRR class) | LC | chr8:6047759-6038531 | 20130731
Soybean Glyma10g32800.1 863 52.5 66.8  
LJGI gnl|LJGI|DC593322 1172 100.0 100.0 similar to UniRef100_A7QGH9 Cluster: Chromosome undetermined scaffold_92, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_92, whole genome shotgun sequence - Vitis vinifera (Grape), partial (21%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v2666490.1 length: 1101 aa.
IPR000157 Toll/interleukin-1 receptor homology (TIR) domain
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
Biological Process GO:0007165 signal transduction    
HMMPfam PF01582 TIR 2.6e-31 10-146
HMMSmart SM00255 Toll 7.6e-38 7-151
ProfileScan PS50104 TIR 25.119 6-151
superfamily SSF52200 Toll/Interleukin 1.4e-37 1-154
IPR000767 Disease resistance protein
Biological Process GO:0006952 defense response    
FPrintScan PR00364 DISEASERSIST 1.9e-23 207-222
281-295
373-387
623-639
IPR002182 NB-ARC
Molecular Function GO:0043531 ADP binding    
HMMPfam PF00931 NB-ARC 5.8e-40 205-456
IPR011713 Leucine-rich repeat 3
HMMPfam PF07725 LRR_3 6.5e-05 604-623
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 1.2e-24 171-412
no_ID  
Gene3D G3DSA:3.40.50.10140 no description 1.9e-20 5-145
Gene3D G3DSA:3.40.50.300 no description 7.2e-08 204-326
Gene3D G3DSA:3.80.10.10 no description 5.1e-29 579-865
HMMPanther PTHR11017 LEUCINE-RICH 1.1e-198 4-905
HMMPanther PTHR11017:SF130DISEASE RESISTANCE 1.1e-198 4-905
Seg seg seg NA 203-217
847-856
superfamily SSF46785 "Winged 4e-13 410-517
superfamily SSF52058 L 2.2e-38 491-880
Wolf-PSORT
Lj3g3v2666490.1	chlo 4, nucl 3.5, cysk_nucl 2.5, cyto 2, E.R. 2, cyto_E.R. 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v2666490.1