Miyakogusa Predicted Gene

Lj3g3v2665430.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
TrEMBL G7LI80_MEDTR 816 56.7 71.6 (tr|G7LI80) Nbs-lrr resistance protein OS=Medicago truncatula GN=MTR_8g018260 PE=4 SV=1
TAIR_pep AT5G17680.1 451 38.8 57.9 | Symbols: | disease resistance protein (TIR-NBS-LRR class), putative | chr5:5822999-5827153 FORWARD LENGTH=1294
Medicago Medtr8g017800.1 854 59.1 74.2 | disease resistance protein (TIR-NBS-LRR class) | LC | chr8:6047759-6038531 | 20130731
Soybean Glyma10g32800.1 758 55.1 69.9  
LJGI gnl|LJGI|DC593322 1011 98.4 98.4 similar to UniRef100_A7QGH9 Cluster: Chromosome undetermined scaffold_92, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_92, whole genome shotgun sequence - Vitis vinifera (Grape), partial (21%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v2665430.1 length: 753 aa.
IPR000157 Toll/interleukin-1 receptor homology (TIR) domain
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
Biological Process GO:0007165 signal transduction    
HMMPfam PF01582 TIR 1.2e-34 19-153
HMMSmart SM00255 Toll 3e-42 16-158
ProfileScan PS50104 TIR 27.129 15-158
superfamily SSF52200 Toll/Interleukin 4.3e-41 5-161
IPR000767 Disease resistance protein
Biological Process GO:0006952 defense response    
FPrintScan PR00364 DISEASERSIST 2.1e-23 214-229
288-302
380-394
630-646
IPR002182 NB-ARC
Molecular Function GO:0043531 ADP binding    
HMMPfam PF00931 NB-ARC 5.4e-38 212-464
IPR011713 Leucine-rich repeat 3
HMMPfam PF07725 LRR_3 4.2e-05 611-630
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 6.9e-24 178-419
no_ID  
Gene3D G3DSA:3.40.50.10140 no description 2.8e-22 13-152
Gene3D G3DSA:3.40.50.300 no description 5e-08 211-331
Gene3D G3DSA:3.80.10.10 no description 4.8e-15 589-747
HMMPanther PTHR11017 LEUCINE-RICH 5.2e-209 1-749
HMMPanther PTHR11017:SF130DISEASE RESISTANCE 5.2e-209 1-749
Seg seg seg NA 2-16
210-224
superfamily SSF46785 "Winged 1.9e-14 417-524
superfamily SSF52058 L 5.8e-22 498-749
Wolf-PSORT
Lj3g3v2665430.1	nucl 9, cyto 4
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v2665430.1