Miyakogusa Predicted Gene

Lj3g3v2665420.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7LI82_MEDTR 958 50.9 65.3 (tr|G7LI82) NBS-containing resistance-like protein OS=Medicago truncatula GN=MTR_8g018280 PE=4 SV=1
TAIR_pep AT5G17680.1 499 37.5 54.6 | Symbols: | disease resistance protein (TIR-NBS-LRR class), putative | chr5:5822999-5827153 FORWARD LENGTH=1294
Medicago Medtr8g018280.1 958 50.9 65.3 | disease resistance protein (TIR-NBS-LRR class), putative | LC | chr8:6198456-6190352 | 20130731
Soybean Glyma10g32800.1 870 52.6 67.6  
LJGI gnl|LJGI|TC73951 690 100.0 100.0 similar to UniRef100_Q06885 Cluster: Glycoprotein gp100 precursor; n=1; Dictyostelium discoideum|Rep: Glycoprotein gp100 precursor - Dictyostelium discoideum (Slime mold), partial (5%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v2665420.1 length: 1150 aa.
IPR000157 Toll/interleukin-1 receptor homology (TIR) domain
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
Biological Process GO:0007165 signal transduction    
HMMPfam PF01582 TIR 6.5e-40 11-145
HMMSmart SM00255 Toll 2.5e-47 8-150
ProfileScan PS50104 TIR 29.482 7-150
superfamily SSF52200 Toll/Interleukin 1.7e-42 2-153
IPR000767 Disease resistance protein
Biological Process GO:0006952 defense response    
FPrintScan PR00364 DISEASERSIST 2.8e-23 208-223
282-296
374-388
781-797
IPR002182 NB-ARC
Molecular Function GO:0043531 ADP binding    
HMMPfam PF00931 NB-ARC 9.6e-40 199-443
IPR011713 Leucine-rich repeat 3
HMMPfam PF07725 LRR_3 3.3e-05 599-618
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 2.7e-26 172-403
no_ID  
Gene3D G3DSA:3.40.50.10140 no description 7.9e-23 5-144
Gene3D G3DSA:3.40.50.300 no description 3.6e-09 207-349
Gene3D G3DSA:3.80.10.10 no description 1.1e-29 542-864
HMMPanther PTHR11017 LEUCINE-RICH 2.1e-204 1-962
HMMPanther PTHR11017:SF130DISEASE RESISTANCE 2.1e-204 1-962
Seg seg seg NA 198-204
208-222
1131-1147
superfamily SSF46785 "Winged 1.2e-15 409-515
superfamily SSF52058 L 8.1e-41 490-881
Wolf-PSORT
Lj3g3v2665420.1	cyto 6, nucl 4, mito 1, plas 1, E.R. 1, pero 1, E.R._plas 1, mito_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v2665420.1