Miyakogusa Predicted Gene

Lj3g3v2664350.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL C6TI26_SOYBN 835 97.6 99.0 (tr|C6TI26) Putative uncharacterized protein OS=Glycine max PE=2 SV=1
TAIR_pep AT1G54270.1 789 92.8 96.4 | Symbols: EIF4A-2 | eif4a-2 | chr1:20260495-20262018 FORWARD LENGTH=412
Medicago Medtr8g018400.1 815 94.7 98.3 | DEAD-box ATP-dependent RNA helicase | HC | chr8:6253262-6248871 | 20130731
Soybean Glyma15g03020.1 835 97.3 99.8  
LJGI gnl|LJGI|TC69722 2468 100.0 100.0 homologue to UniRef100_A7PE49 Cluster: Chromosome chr11 scaffold_13, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr11 scaffold_13, whole genome shotgun sequence - Vitis vinifera (Grape), complete
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v2664350.1 length: 413 aa.
IPR000629 RNA helicase, ATP-dependent, DEAD-box, conserved site
method AccNumber shortName E-value location
Molecular Function GO:0003676 nucleic acid binding    
Molecular Function GO:0005524 ATP binding    
Molecular Function GO:0008026 ATP-dependent helicase activity    
PatternScan PS00039 DEAD_ATP_HELICASE NA 187-195
IPR001650 Helicase, C-terminal
Molecular Function GO:0003676 nucleic acid binding    
Molecular Function GO:0004386 helicase activity    
Molecular Function GO:0005524 ATP binding    
HMMPfam PF00271 Helicase_C 2.9e-25 299-374
HMMSmart SM00490 helicase 2.1e-31 293-374
ProfileScan PS51194 HELICASE_CTER 26.060 252-413
IPR011545 DNA/RNA helicase, DEAD/DEAH box type, N-terminal
Molecular Function GO:0003676 nucleic acid binding    
Molecular Function GO:0005524 ATP binding    
Molecular Function GO:0008026 ATP-dependent helicase activity    
HMMPfam PF00270 DEAD 3.4e-39 65-226
IPR014001 Helicase, superfamily 1/2, ATP-binding domain
HMMSmart SM00487 DEAD-like 1.4e-54 59-256
ProfileScan PS51192 HELICASE_ATP_BIND_1 28.359 71-241
IPR014014 RNA helicase, DEAD-box type, Q motif
ProfileScan PS51195 Q_MOTIF 10.321 40-68
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 3.9e-72 107-397
no_ID  
Gene3D G3DSA:3.40.50.300 no description 1.3e-54 37-252
253-409
HMMPanther PTHR24031 FAMILY 6.2e-294 35-413
HMMPanther PTHR24031:SF84 SUBFAMILY 6.2e-294 35-413
Wolf-PSORT
Lj3g3v2664350.1	cyto 12, chlo 1, pero 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v2664350.1