Miyakogusa Predicted Gene

Lj3g3v2657800.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL E0WC41_SOYBN 430 76.1 83.7 (tr|E0WC41) CCAAT-binding transcription factor family protein OS=Glycine max GN=NF-YA1 PE=2 SV=1
TAIR_pep AT1G72830.1 211 45.9 59.7 | Symbols: HAP2C, ATHAP2C, NF-YA3 | nuclear factor Y, subunit A3 | chr1:27405699-27407088 REVERSE LENGTH=340
Medicago Medtr8g019540.1 378 67.9 77.7 | CCAAT-binding transcription factor | HC | chr8:6897923-6894383 | 20130731
Soybean Glyma07g04050.4 430 76.1 83.7  
LJGI gnl|LJGI|TC70895 704 99.2 99.2 similar to UniRef100_A7P6L4 Cluster: Chromosome chr9 scaffold_7, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr9 scaffold_7, whole genome shotgun sequence - Vitis vinifera (Grape), partial (23%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v2657800.1 length: 303 aa.
IPR001289 CCAAT-binding transcription factor, subunit B
method AccNumber shortName E-value location
Molecular Function GO:0003700 sequence-specific DNA binding transcription factor activity    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
FPrintScan PR00616 CCAATSUBUNTB 2.1e-24 142-164
173-196
HMMPanther PTHR12632 TRANSCRIPTION 2.2e-60 20-258
HMMPfam PF02045 CBFB_NFYA 1.8e-30 140-196
HMMSmart SM00521 CCAAT-Binding 3.4e-37 138-199
ProfileScan PS51152 NFYA_HAP2_2 37.689 139-199
IPR018362 CCAAT-binding factor, conserved site
Molecular Function GO:0003677 DNA binding    
Cellular Component GO:0016602 CCAAT-binding factor complex    
PatternScan PS00686 NFYA_HAP2_1 NA 144-164
Wolf-PSORT
Lj3g3v2657800.1	nucl 11, chlo 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v2657800.1