Miyakogusa Predicted Gene
- Lj3g3v2576730.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr3
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I3SCY9_LOTJA |
333 |
91.1 |
91.1 |
(tr|I3SCY9) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1 |
| TAIR_pep |
AT1G72510.2 |
165 |
48.8 |
67.5 |
| Symbols: | Protein of unknown function (DUF1677) | chr1:27303906-27304403 FORWARD LENGTH=165 |
| Medicago |
Medtr8g021190.1 |
246 |
76.5 |
81.5 |
| DUF1677 family protein | HC | chr8:7553157-7550942 | 20130731 |
| Soybean |
Glyma07g04530.1 |
228 |
73.3 |
77.6 |
|
| LJGI |
gnl|LJGI|TC60727 |
1080 |
100.0 |
100.0 |
similar to UniRef100_A7P4V4 Cluster: Chromosome chr4 scaffold_6, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr4 scaffold_6, whole genome shotgun sequence - Vitis vinifera (Grape), partial (53%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj3g3v2576730.1 |
length: 180 aa. |
| IPR012876 |
Protein of unknown function DUF1677, plant |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF07911 |
DUF1677 |
1.7e-39 |
32-122 |
| no_ID |
|
| Seg |
seg |
seg |
NA |
125-140 |
- Wolf-PSORT
Lj3g3v2576730.1 cyto 10, nucl 2, chlo 1, golg 1, cysk_nucl 1, nucl_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj3g3v2576730.1 |
|