Miyakogusa Predicted Gene

Lj3g3v2576580.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL C6SZ12_SOYBN 251 96.9 97.7 (tr|C6SZ12) Uncharacterized protein OS=Glycine max PE=2 SV=1
TAIR_pep AT3G14080.2 241 90.6 96.1 | Symbols: | Small nuclear ribonucleoprotein family protein | chr3:4667717-4668989 FORWARD LENGTH=128
Medicago Medtr8g021250.1 243 91.4 96.1 | small nuclear ribonucleoprotein | HC | chr8:7638054-7641793 | 20130731
Soybean Glyma07g04580.1 251 96.9 97.7  
LJGI gnl|LJGI|TC79366 767 100.0 100.0 similar to UniRef100_A7PDU1 Cluster: Chromosome chr11 scaffold_13, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr11 scaffold_13, whole genome shotgun sequence - Vitis vinifera (Grape), partial (53%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v2576580.1 length: 128 aa.
IPR001163 Ribonucleoprotein LSM domain
method AccNumber shortName E-value location
HMMPfam PF01423 LSM 1.2e-16 15-80
IPR006649 Ribonucleoprotein LSM domain, eukaryotic/archaea-type
HMMSmart SM00651 snRNP 1.1e-21 13-81
IPR010920 Like-Sm (LSM) domain
superfamily SSF50182 Sm-like 7.6e-18 11-83
no_ID  
Gene3D G3DSA:2.30.30.100 no description 3.1e-19 14-87
HMMPanther PTHR15588 LSM1 2.3e-58 1-123
HMMPanther PTHR15588:SF5 SUBFAMILY 2.3e-58 1-123
Wolf-PSORT
Lj3g3v2576580.1	cyto 9, chlo 3, cysk 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v2576580.1