Miyakogusa Predicted Gene

Lj3g3v2576340.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL B7FLK8_MEDTR 630 91.3 92.2 (tr|B7FLK8) Uncharacterized protein OS=Medicago truncatula PE=2 SV=1
TAIR_pep AT1G17370.1 578 86.1 92.9 | Symbols: UBP1B | oligouridylate binding protein 1B | chr1:5951842-5954825 REVERSE LENGTH=419
Medicago Medtr8g022050.1 629 96.5 97.7 | nucleolysin TIAR-like protein | HC | chr8:7704241-7709952 | 20130731
Soybean Glyma07g04640.1 627 89.3 91.4  
LJGI gnl|LJGI|TC71154 1965 99.8 99.8 homologue to UniRef100_A7P6F6 Cluster: Chromosome chr9 scaffold_7, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr9 scaffold_7, whole genome shotgun sequence - Vitis vinifera (Grape), partial (97%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v2576340.1 length: 333 aa.
IPR000504 RNA recognition motif domain
method AccNumber shortName E-value location
Molecular Function GO:0003676 nucleic acid binding    
HMMPfam PF00076 RRM_1 9.7e-11 56-122
141-211
262-328
HMMSmart SM00360 RNA 4.7e-15 55-124
140-213
261-331
ProfileScan PS50102 RRM 14.232 54-128
139-217
260-333
IPR012677 Nucleotide-binding, alpha-beta plait
Molecular Function GO:0000166 nucleotide binding    
Gene3D G3DSA:3.30.70.330 no description 8.8e-17 54-135
136-218
246-332
no_ID  
HMMPanther PTHR24012 FAMILY 2.4e-150 32-333
HMMPanther PTHR24012:SF31 SUBFAMILY 2.4e-150 32-333
Seg seg seg NA 8-23
superfamily SSF54928 RNA-binding 1.8e-17 48-224
223-332
Wolf-PSORT
Lj3g3v2576340.1	nucl 8, pero 3, chlo 2, cyto_pero 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v2576340.1