Miyakogusa Predicted Gene

Lj3g3v2542370.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr3

Full length sequence(45610869 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL I1JS71_SOYBN 246 44.9 58.9 (tr|I1JS71) Uncharacterized protein OS=Glycine max PE=4 SV=2

TAIR_pep AT1G53800.2 160 34.2 52.2 | Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G53250.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). | chr1:20081888-20084320 FORWARD LENGTH=572

Medicago Medtr7g117530.2 211 40.3 57.7 | NUMOD3 motif protein | HC | chr7:48689904-48685841 | 20130731

Soybean Glyma19g45150.1 224 41.8 56.3

LJGI gnl|LJGI|TC81926 170 84.9 84.9 similar to UniRef100_A7P6A2 Cluster: Chromosome chr9 scaffold_7, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr9 scaffold_7, whole genome shotgun sequence - Vitis vinifera (Grape), partial (28%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj3g3v2542370.1 length: 328 aa.

no_ID

method AccNumber shortName E-value location

Coil coil coiled-coil NA 207-235

Seg seg seg NA 65-82
213-233

Wolf-PSORT

Lj3g3v2542370.1 chlo 6, nucl 5, mito 2

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj3g3v2542370.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	I1JS71_SOYBN	246	44.9	58.9	(tr\|I1JS71) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep	AT1G53800.2	160	34.2	52.2	\| Symbols: \| unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G53250.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). \| chr1:20081888-20084320 FORWARD LENGTH=572
Medicago	Medtr7g117530.2	211	40.3	57.7	\| NUMOD3 motif protein \| HC \| chr7:48689904-48685841 \| 20130731
Soybean	Glyma19g45150.1	224	41.8	56.3
LJGI	gnl\|LJGI\|TC81926	170	84.9	84.9	similar to UniRef100_A7P6A2 Cluster: Chromosome chr9 scaffold_7, whole genome shotgun sequence; n=1; Vitis vinifera\|Rep: Chromosome chr9 scaffold_7, whole genome shotgun sequence - Vitis vinifera (Grape), partial (28%)

no_ID
Lj3g3v2542370.1				length: 328 aa.
method	AccNumber	shortName	E-value	location
Coil	coil	coiled-coil	NA	207-235
Seg	seg	seg	NA	65-82 213-233