Miyakogusa Predicted Gene

Lj3g3v2532340.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1JS66_SOYBN 864 98.4 99.3 (tr|I1JS66) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G53750.1 848 96.7 98.4 | Symbols: RPT1A | regulatory particle triple-A 1A | chr1:20065921-20068324 REVERSE LENGTH=426
Medicago Medtr8g023550.1 828 95.8 96.0 | 26S proteasome regulatory complex protein | HC | chr8:8525894-8529361 | 20130731
Soybean Glyma16g01810.1 869 99.1 99.8  
LJGI gnl|LJGI|TC60911 2498 99.5 99.5 homologue to UniRef100_Q41365 Cluster: 26S protease regulatory subunit 7; n=4; Magnoliophyta|Rep: 26S protease regulatory subunit 7 - Spinacia oleracea (Spinach), complete
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v2532340.2 length: 426 aa.
IPR003593 AAA+ ATPase domain
method AccNumber shortName E-value location
Molecular Function GO:0000166 nucleotide binding    
Molecular Function GO:0017111 nucleoside-triphosphatase activity    
HMMSmart SM00382 ATPases 2.6e-20 201-340
IPR003959 ATPase, AAA-type, core
Molecular Function GO:0005524 ATP binding    
HMMPfam PF00004 AAA 9e-40 205-337
IPR003960 ATPase, AAA-type, conserved site
Molecular Function GO:0005524 ATP binding    
PatternScan PS00674 AAA NA 308-326
IPR005937 26S proteasome subunit P45
Cellular Component GO:0005737 cytoplasm    
Molecular Function GO:0016787 hydrolase activity    
Biological Process GO:0030163 protein catabolic process    
HMMTigr TIGR01242 26Sp45: 3.4e-124 98-409
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 2.3e-70 157-410
no_ID  
Coil coil coiled-coil NA 38-59
Gene3D G3DSA:1.10.8.60 no description 2e-23 348-412
Gene3D G3DSA:3.40.50.300 no description 1.3e-57 158-347
HMMPanther PTHR23073 26S 0 6-426
HMMPanther PTHR23073:SF13 26S 0 6-426
Wolf-PSORT
Lj3g3v2532340.2	cyto 7, extr 2, chlo 1, mito 1, pero 1, cysk 1, golg 1, chlo_mito 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v2532340.2