Miyakogusa Predicted Gene

Lj3g3v2520080.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7KZP1_SOYBN 308 48.3 53.7 (tr|K7KZP1) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G01030.1 215 84.7 91.5 | Symbols: NGA3 | AP2/B3-like transcriptional factor family protein | chr1:11864-12940 REVERSE LENGTH=358
Medicago Medtr8g023990.1 295 59.9 66.2 | B3 DNA-binding domain protein | HC | chr8:8776349-8774219 | 20130731
Soybean Glyma07g05380.1 283 51.4 56.1  
LJGI gnl|LJGI|DC596118 1124 100.0 100.0 similar to UniRef100_A7QJ19 Cluster: Chromosome chr2 scaffold_105, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr2 scaffold_105, whole genome shotgun sequence - Vitis vinifera (Grape), partial (18%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v2520080.1 length: 552 aa.
IPR003340 B3 DNA binding domain
method AccNumber shortName E-value location
Molecular Function GO:0003677 DNA binding    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
HMMPfam PF02362 B3 2.3e-28 216-319
HMMSmart SM01019 B3 2.6e-22 216-321
ProfileScan PS50863 B3 14.029 216-321
IPR015300 DNA-binding pseudobarrel domain
Gene3D G3DSA:2.40.330.10 no description 1.7e-40 206-322
superfamily SSF101936 DNA-binding 2.8e-28 210-327
no_ID  
Coil coil coiled-coil NA 9-37
HMMPanther PTHR31140 FAMILY 8.9e-75 173-499
Seg seg seg NA 16-51
59-74
79-90
142-152
175-180
193-208
366-405
431-436
456-483
497-509
Wolf-PSORT
Lj3g3v2520080.1	nucl 13
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v2520080.1