Miyakogusa Predicted Gene

Lj3g3v2517860.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL D0UIX2_CUCME 124 38.3 54.4 (tr|D0UIX2) Putative transposase OS=Cucumis melo PE=4 SV=1
TAIR_pep AT3G42170.1 55.1 26.7 43.6 | Symbols: | BED zinc finger ;hAT family dimerisation domain | chr3:14321838-14323928 FORWARD LENGTH=696
Medicago Medtr6g027800.1 78.2 36.1 56.5 | AC transposase, putative | LC | chr6:9753196-9753852 | 20130731
Soybean Glyma08g10320.1 68.9 36.4 56.8  
LJGI gnl|LJGI|FS323294 87.7 82.6 82.6 UniRef100_A8I8R0 Cluster: Predicted protein; n=1; Chlamydomonas reinhardtii|Rep: Predicted protein - Chlamydomonas reinhardtii, partial (6%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v2517860.2 length: 239 aa.
IPR003656 Zinc finger, BED-type predicted
method AccNumber shortName E-value location
Molecular Function GO:0003677 DNA binding    
HMMPfam PF02892 zf-BED 1.7e-10 61-111
HMMSmart SM00614 BED 9.8e-10 58-113
ProfileScan PS50808 ZF_BED 10.879 58-117
no_ID  
HMMPanther PTHR23272 BED 4.6e-13 146-228
HMMPanther PTHR23272:SF0 SUBFAMILY 4.6e-13 146-228
Seg seg seg NA 39-55
superfamily SSF140996 Hermes 2.6e-06 146-205
superfamily SSF57667 C2H2 1.9e-07 61-121
Wolf-PSORT
Lj3g3v2517860.2	cyto 11, nucl 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v2517860.2