Miyakogusa Predicted Gene

Lj3g3v2517590.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3T082_LOTJA 514 95.3 95.3 (tr|I3T082) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT1G01080.1 242 59.3 78.3 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family protein | chr1:45503-46789 REVERSE LENGTH=293
Medicago Medtr7g118230.1 166 54.1 65.6 | RNA recognition motif, a.k.a. RRM, RBD protein | HC | chr7:49069532-49073325 | 20130731
Soybean Glyma07g05540.1 285 55.2 70.9  
LJGI gnl|LJGI|TC62000 1713 99.8 99.8 weakly similar to UniRef100_A7PXT7 Cluster: Chromosome chr15 scaffold_37, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr15 scaffold_37, whole genome shotgun sequence - Vitis vinifera (Grape), partial (57%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v2517590.1 length: 290 aa.
IPR000504 RNA recognition motif domain
method AccNumber shortName E-value location
Molecular Function GO:0003676 nucleic acid binding    
HMMPfam PF00076 RRM_1 1.5e-16 104-174
211-279
HMMSmart SM00360 RNA 2.3e-20 103-176
210-282
ProfileScan PS50102 RRM 17.046 102-180
209-286
IPR012677 Nucleotide-binding, alpha-beta plait
Molecular Function GO:0000166 nucleotide binding    
Gene3D G3DSA:3.30.70.330 no description 8.4e-21 80-180
207-283
no_ID  
HMMPanther PTHR24012 FAMILY 2e-57 85-283
HMMPanther PTHR24012:SF151SUBFAMILY NOT 2e-57 85-283
Seg seg seg NA 2-16
87-99
superfamily SSF54928 RNA-binding 3.2e-21 85-182
209-285
Wolf-PSORT
Lj3g3v2517590.1	chlo 13
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v2517590.1