Miyakogusa Predicted Gene

Lj3g3v2478840.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1MKG1_SOYBN 242 85.3 92.6 (tr|I1MKG1) Uncharacterized protein OS=Glycine max PE=3 SV=1
TAIR_pep AT1G01200.1 158 61.9 71.2 | Symbols: ATRABA3, ATRAB-A3, RABA3 | RAB GTPase homolog A3 | chr1:86715-88145 REVERSE LENGTH=237
Medicago Medtr8g027220.1 216 79.4 86.8 | Ras-related small GTP-binding family protein | HC | chr8:9528022-9525895 | 20130731
Soybean Glyma16g02460.1 242 85.3 92.6  
LJGI gnl|LJGI|TC59323 248 87.2 87.2 UniRef100_Q40192 Cluster: RAB11B; n=1; Lotus japonicus|Rep: RAB11B - Lotus japonicus, complete
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v2478840.2 length: 136 aa.
IPR001806 Small GTPase superfamily
method AccNumber shortName E-value location
Molecular Function GO:0005525 GTP binding    
Biological Process GO:0007264 small GTPase mediated signal transduction    
FPrintScan PR00449 RASTRNSFRMNG 3.7e-10 28-41
63-85
HMMPfam PF00071 Ras 2.5e-24 1-86
IPR003579 Small GTPase superfamily, Rab type
Molecular Function GO:0005525 GTP binding    
Biological Process GO:0007264 small GTPase mediated signal transduction    
Biological Process GO:0015031 protein transport    
HMMSmart SM00175 Rab 2.1e-12 1-88
IPR020849 Small GTPase superfamily, Ras type
Molecular Function GO:0003924 GTPase activity    
Molecular Function GO:0005525 GTP binding    
Biological Process GO:0006184 GTP catabolic process    
Biological Process GO:0007165 signal transduction    
Cellular Component GO:0016020 membrane    
HMMSmart SM00173 Ras 1.1e-05 2-88
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 1.3e-24 1-85
no_ID  
Gene3D G3DSA:3.40.50.300 no description 1.8e-27 1-91
HMMPanther PTHR24073 FAMILY 3.5e-44 1-95
HMMPanther PTHR24073:SF87 SUBFAMILY 3.5e-44 1-95
ProfileScan PS51419 RAB 17.235 1-126
Wolf-PSORT
Lj3g3v2478840.2	chlo 5, nucl 5, cyto 4
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v2478840.2