Miyakogusa Predicted Gene

Lj3g3v2476580.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1MKH5_SOYBN 857 85.9 91.9 (tr|I1MKH5) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT4G10840.1 677 66.9 79.2 | Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr4:6656614-6659033 FORWARD LENGTH=609
Medicago Medtr8g027385.1 829 83.4 89.8 | kinesin light chain | HC | chr8:9665434-9669186 | 20130731
Soybean Glyma16g02600.1 857 85.9 91.9  
LJGI gnl|LJGI|TC68034 135 80.7 80.7 similar to UniRef100_A7QU42 Cluster: Chromosome chr2 scaffold_176, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr2 scaffold_176, whole genome shotgun sequence - Vitis vinifera (Grape), partial (27%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v2476580.1 length: 483 aa.
IPR011990 Tetratricopeptide-like helical
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 9.7e-16 14-72
73-198
199-253
265-423
IPR013026 Tetratricopeptide repeat-containing domain
Molecular Function GO:0005515 protein binding    
ProfileScan PS50293 TPR_REGION 16.334 14-132
181-424
IPR013105 Tetratricopeptide TPR2
HMMPfam PF07719 TPR_2 0.0042 269-297
IPR019734 Tetratricopeptide repeat
Molecular Function GO:0005515 protein binding    
HMMSmart SM00028 Tetratricopeptide 13 14-47
57-90
99-132
181-214
223-256
266-299
349-382
391-424
ProfileScan PS50005 TPR 6.933 14-47
57-90
99-132
181-214
223-256
266-299
307-340
349-382
391-424
no_ID  
HMMPanther PTHR19959 KINESIN 3.2e-106 7-453
HMMPanther PTHR19959:SF23 SUBFAMILY 3.2e-106 7-453
HMMPfam PF13374 TPR_10 0.009 13-40
HMMPfam PF13424 TPR_12 6.8e-11 60-130
178-255
351-422
Seg seg seg NA 283-297
superfamily SSF48452 TPR-like 2.1e-17 14-427
Wolf-PSORT
Lj3g3v2476580.1	cyto 6, chlo 5, nucl 1, mito 1, plas 1, nucl_plas 1, mito_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v2476580.1 Not targeted -28.847 -1.125 -1.914 28.11% -25.808