Miyakogusa Predicted Gene

Lj3g3v2476570.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7KZU1_SOYBN 3016 77.9 86.0 (tr|K7KZU1) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT2G46560.1 1351 41.6 56.9 | Symbols: | transducin family protein / WD-40 repeat family protein | chr2:19115570-19125856 REVERSE LENGTH=2513
Medicago Medtr8g027425.1 2801 73.7 82.1 | transducin family protein/WD-40 repeat protein | HC | chr8:9694798-9709652 | 20130731
Soybean Glyma16g02620.1 2869 74.5 81.5  
LJGI gnl|LJGI|FS343962 1174 99.7 99.7  
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v2476570.1 length: 1980 aa.
IPR001680 WD40 repeat
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00400 WD40 0.035 180-221
HMMSmart SM00320 WD40 0.39 171-221
418-460
632-692
704-749
IPR015943 WD40/YVTN repeat-like-containing domain
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:2.130.10.10 no description 8.4e-09 678-797
IPR017986 WD40-repeat-containing domain
Molecular Function GO:0005515 protein binding    
superfamily SSF50978 WD40 6.8e-13 151-802
IPR022033 RAVE complex protein Rav1 C-terminal
HMMPfam PF12234 Rav1p_C 1.4e-67 922-1348
no_ID  
HMMPanther PTHR13950 RABCONNECTIN-RELATED 0 76-1878
HMMPanther PTHR13950:SF8 SUBFAMILY 0 76-1878
Seg seg seg NA 3-19
40-60
1105-1110
1255-1264
1556-1565
Wolf-PSORT
Lj3g3v2476570.1	chlo 8, plas 4, chlo_mito 4
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v2476570.1