Miyakogusa Predicted Gene

Lj3g3v2443170.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr3

Full length sequence(45610869 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL I1JS00_SOYBN 1034 83.9 90.3 (tr|I1JS00) Uncharacterized protein OS=Glycine max PE=4 SV=2

TAIR_pep AT2G46500.2 690 58.1 75.1 | Symbols: ATPI4K GAMMA 4, UBDK GAMMA 4, PI4K GAMMA 4 | phosphoinositide 4-kinase gamma 4 | chr2:19086741-19088534 REVERSE LENGTH=566

Medicago Medtr7g117395.2 992 82.3 89.3 | phosphatidylinositol 3- and 4-kinase | HC | chr7:48519484-48516353 | 20130731

Soybean Glyma03g41850.1 983 81.1 86.9

LJGI gnl|LJGI|TC80698 557 87.2 87.2 similar to UniRef100_A7QWD7 Cluster: Chromosome undetermined scaffold_203, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_203, whole genome shotgun sequence - Vitis vinifera (Grape), partial (35%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj3g3v2443170.1 length: 605 aa.

IPR000403 Phosphatidylinositol 3-/4-kinase, catalytic domain

method AccNumber shortName E-value location

Molecular Function GO:0016773 phosphotransferase activity, alcohol group as acceptor

HMMPfam PF00454 PI3_PI4_kinase 8.2e-42 290-545

IPR000626 Ubiquitin

Molecular Function GO:0005515 protein binding

HMMPfam PF00240 ubiquitin 2.9e-07 46-110
119-189

HMMSmart SM00213 Ubiquitin 0.013 36-109
114-188

IPR011009 Protein kinase-like domain

Molecular Function GO:0016772 transferase activity, transferring phosphorus-containing groups

superfamily SSF56112 Protein 6.4e-09 430-601

IPR019955 Ubiquitin supergroup

ProfileScan PS50053 UBIQUITIN_2 10.658 34-109
116-182

no_ID

Gene3D G3DSA:3.10.20.90 no description 1.1e-10 42-108
116-191

HMMPanther PTHR10666 UBIQUITIN 7.1e-248 29-594

HMMPanther PTHR10666:SF47 HYPOTHETICAL 7.1e-248 29-594

superfamily SSF54236 Ubiquitin-like 3.2e-12 36-113
110-193

Wolf-PSORT

Lj3g3v2443170.1 nucl 4, plas 2.5, chlo 2, cyto 2, cysk_nucl 2, mito_plas 2

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj3g3v2443170.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	I1JS00_SOYBN	1034	83.9	90.3	(tr\|I1JS00) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep	AT2G46500.2	690	58.1	75.1	\| Symbols: ATPI4K GAMMA 4, UBDK GAMMA 4, PI4K GAMMA 4 \| phosphoinositide 4-kinase gamma 4 \| chr2:19086741-19088534 REVERSE LENGTH=566
Medicago	Medtr7g117395.2	992	82.3	89.3	\| phosphatidylinositol 3- and 4-kinase \| HC \| chr7:48519484-48516353 \| 20130731
Soybean	Glyma03g41850.1	983	81.1	86.9
LJGI	gnl\|LJGI\|TC80698	557	87.2	87.2	similar to UniRef100_A7QWD7 Cluster: Chromosome undetermined scaffold_203, whole genome shotgun sequence; n=1; Vitis vinifera\|Rep: Chromosome undetermined scaffold_203, whole genome shotgun sequence - Vitis vinifera (Grape), partial (35%)

IPR000403	Phosphatidylinositol 3-/4-kinase, catalytic domain
Lj3g3v2443170.1				length: 605 aa.
method	AccNumber	shortName	E-value	location
Molecular Function	GO:0016773	phosphotransferase activity, alcohol group as acceptor
HMMPfam	PF00454	PI3_PI4_kinase	8.2e-42	290-545
IPR000626	Ubiquitin
Molecular Function	GO:0005515	protein binding
HMMPfam	PF00240	ubiquitin	2.9e-07	46-110 119-189
HMMSmart	SM00213	Ubiquitin	0.013	36-109 114-188
IPR011009	Protein kinase-like domain
Molecular Function	GO:0016772	transferase activity, transferring phosphorus-containing groups
superfamily	SSF56112	Protein	6.4e-09	430-601
IPR019955	Ubiquitin supergroup
ProfileScan	PS50053	UBIQUITIN_2	10.658	34-109 116-182
no_ID
Gene3D	G3DSA:3.10.20.90	no description	1.1e-10	42-108 116-191
HMMPanther	PTHR10666	UBIQUITIN	7.1e-248	29-594
HMMPanther	PTHR10666:SF47	HYPOTHETICAL	7.1e-248	29-594
superfamily	SSF54236	Ubiquitin-like	3.2e-12	36-113 110-193