Miyakogusa Predicted Gene

Lj3g3v2442020.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3SRH3_LOTJA 437 93.5 93.5 (tr|I3SRH3) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT5G24270.2 244 62.3 73.3 | Symbols: SOS3 | Calcium-binding EF-hand family protein | chr5:8238781-8240179 REVERSE LENGTH=222
Medicago Medtr8g027620.1 308 68.1 76.3 | calcineurin B-like protein 4-1 | HC | chr8:9928680-9926307 | 20130731
Soybean Glyma04g41430.1 243 63.2 75.8  
LJGI gnl|LJGI|GO031721 1225 99.4 99.4 similar to UniRef100_A4ZKI5 Cluster: Calcineurin B-like protein 4-1; n=1; Populus trichocarpa|Rep: Calcineurin B-like protein 4-1 - Populus trichocarpa (Western balsam poplar) (Populus balsamiferasubsp. trichocarpa), partial (60%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v2442020.1 length: 260 aa.
IPR001125 Recoverin
method AccNumber shortName E-value location
Molecular Function GO:0005509 calcium ion binding    
FPrintScan PR00450 RECOVERIN 8.2e-11 131-152
178-196
224-244
IPR002048 EF-hand domain
Molecular Function GO:0005509 calcium ion binding    
HMMPfam PF00036 efhand 6.3e-07 128-151
HMMSmart SM00054 EF-hand, 5.9 127-155
164-192
208-236
ProfileScan PS50222 EF_HAND_2 9.436 123-158
160-195
204-239
IPR011992 EF-hand-like domain
Molecular Function GO:0005509 calcium ion binding    
Gene3D G3DSA:1.10.238.10 no description 2.4e-46 75-253
HMMPfam PF13499 EF_hand_5 1.1e-11 164-232
IPR018247 EF-Hand 1, calcium-binding site
PatternScan PS00018 EF_HAND_1 NA 136-148
no_ID  
HMMPanther PTHR23056 CALCINEURIN 4.3e-104 71-257
HMMPanther PTHR23056:SF3 CALCINEURIN 4.3e-104 71-257
Seg seg seg NA 193-206
superfamily SSF47473 EF-hand 1.9e-42 73-259
Wolf-PSORT
Lj3g3v2442020.1	cyto 7.5, cyto_E.R. 4.5, nucl 3, mito 1, extr 1, cysk 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v2442020.1