Miyakogusa Predicted Gene

Lj3g3v2441870.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7LFT8_SOYBN 1129 75.9 85.0 (tr|K7LFT8) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT4G19890.1 884 64.1 79.2 | Symbols: | Pentatricopeptide repeat (PPR-like) superfamily protein | chr4:10786948-10789053 REVERSE LENGTH=701
Medicago Medtr7g405940.1 1159 82.8 91.8 | PPR containing plant-like protein | HC | chr7:313415-311451 | 20130731
Soybean Glyma09g37760.1 1075 79.7 88.8  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v2441870.1 length: 702 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.14 150-175
HMMPfam PF12854 PPR_1 8.7e-12 421-450
HMMPfam PF13041 PPR_2 2e-14 178-227
283-332
354-403
460-508
533-578
HMMTigr TIGR00756 PPR: 3.7e-08 150-180
182-215
217-249
288-320
321-355
358-391
393-426
427-451
462-496
497-530
533-566
568-599
ProfileScan PS51375 PPR 5.568 144-178
179-213
214-248
249-283
284-318
319-354
355-389
390-424
425-459
460-494
495-529
530-564
565-599
632-666
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 1.2e-06 298-556
no_ID  
HMMPanther PTHR24015 FAMILY 7e-158 22-675
HMMPanther PTHR24015:SF0 SUBFAMILY 7e-158 22-675
Seg seg seg NA 28-52
superfamily SSF81901 HCP-like 1.3e-05 401-596
127-386
Wolf-PSORT
Lj3g3v2441870.1	mito 6.5, chlo 6, cyto_mito 4
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v2441870.1