Miyakogusa Predicted Gene

Lj3g3v2439650.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1KHW2_SOYBN 983 74.3 79.2 (tr|I1KHW2) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT5G63630.1 823 81.4 91.8 | Symbols: | P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr5:25472598-25476402 REVERSE LENGTH=788
Medicago Medtr8g027770.1 966 73.8 81.3 | DEAD-box ATP-dependent RNA helicase family protein | HC | chr8:10111776-10105760 | 20130731
Soybean Glyma07g06240.1 981 74.3 79.2  
LJGI gnl|LJGI|TC73020 979 100.0 100.0 similar to UniRef100_Q8TFG9 Cluster: Uncharacterized serine/threonine-rich protein PB15E9.01c precursor; n=1; Schizosaccharomyces pombe|Rep: Uncharacterized serine/threonine-rich protein PB15E9.01c precursor - Schizosaccharomyces pombe (Fission yeast), partial (4%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v2439650.1 length: 692 aa.
IPR001650 Helicase, C-terminal
method AccNumber shortName E-value location
Molecular Function GO:0003676 nucleic acid binding    
Molecular Function GO:0004386 helicase activity    
Molecular Function GO:0005524 ATP binding    
HMMPfam PF00271 Helicase_C 2.4e-20 501-577
HMMSmart SM00490 helicase 6e-25 496-577
ProfileScan PS51194 HELICASE_CTER 18.446 473-619
IPR011545 DNA/RNA helicase, DEAD/DEAH box type, N-terminal
Molecular Function GO:0003676 nucleic acid binding    
Molecular Function GO:0005524 ATP binding    
Molecular Function GO:0008026 ATP-dependent helicase activity    
HMMPfam PF00270 DEAD 2.8e-44 249-426
IPR014001 Helicase, superfamily 1/2, ATP-binding domain
HMMSmart SM00487 DEAD-like 1.5e-48 243-456
ProfileScan PS51192 HELICASE_ATP_BIND_1 28.378 255-438
IPR014014 RNA helicase, DEAD-box type, Q motif
ProfileScan PS51195 Q_MOTIF 9.466 224-252
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 9.5e-65 299-600
no_ID  
Gene3D G3DSA:3.40.50.300 no description 4.3e-36 216-449
450-599
HMMPanther PTHR24031 FAMILY 4.2e-273 50-688
HMMPanther PTHR24031:SF98 PUTATIVE 4.2e-273 50-688
Seg seg seg NA 5-14
122-133
165-184
210-219
Wolf-PSORT
Lj3g3v2439650.1	chlo 10.5, chlo_mito 7.33333, mito 3, cyto_mito 2.33333
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v2439650.1