Miyakogusa Predicted Gene

Lj3g3v2437590.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7MEW1_SOYBN 1461 76.3 85.8 (tr|K7MEW1) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT4G01030.1 900 55.8 73.7 | Symbols: | pentatricopeptide (PPR) repeat-containing protein | chr4:448336-450642 REVERSE LENGTH=768
Medicago Medtr8g027810.1 1440 73.4 84.7 | pentatricopeptide (PPR) repeat protein | HC | chr8:10160876-10157214 | 20130731
Soybean Glyma16g02920.1 1325 76.3 85.0  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v2437590.1 length: 942 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.0065 230-256
300-326
609-634
709-733
HMMPfam PF13041 PPR_2 1.6e-09 327-373
463-510
533-581
638-681
HMMTigr TIGR00756 PPR: 0.0005 300-325
331-364
467-499
501-535
536-569
638-671
672-705
ProfileScan PS51375 PPR 5.831 125-160
161-195
227-261
328-362
297-327
262-296
363-397
464-498
433-463
499-533
534-568
635-669
604-634
569-603
670-700
706-736
772-806
818-853
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 4.1e-05 457-632
no_ID  
HMMPanther PTHR24015 FAMILY 0 230-942
HMMPanther PTHR24015:SF107SUBFAMILY NOT 0 230-942
HMMPfam PF14432 DYW_deaminase 1.2e-13 820-932
Wolf-PSORT
Lj3g3v2437590.1	chlo 11, nucl 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v2437590.1