Miyakogusa Predicted Gene
- Lj3g3v2437560.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr3
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
B7FNA7_MEDTR |
602 |
68.3 |
73.5 |
(tr|B7FNA7) Putative uncharacterized protein (Fragment) OS=Medicago truncatula PE=1 SV=1 |
| TAIR_pep |
AT4G01050.1 |
425 |
53.6 |
66.8 |
| Symbols: TROL | thylakoid rhodanese-like | chr4:455874-458175 FORWARD LENGTH=466 |
| Medicago |
Medtr8g027835.1 |
601 |
68.3 |
73.5 |
| thylakoid rhodanese-like protein | HC | chr8:10166016-10171090 | 20130731 |
| Soybean |
Glyma07g06300.1 |
600 |
72.8 |
80.6 |
|
| LJGI |
gnl|LJGI|TC72949 |
2280 |
99.9 |
99.9 |
similar to UniRef100_A7PZU0 Cluster: Chromosome chr15 scaffold_40, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr15 scaffold_40, whole genome shotgun sequence - Vitis vinifera (Grape), partial (72%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj3g3v2437560.1 |
length: 456 aa. |
| IPR001763 |
Rhodanese-like domain |
| method |
AccNumber |
shortName |
E-value |
location |
| Gene3D |
G3DSA:3.40.250.10 |
no description |
6.4e-35 |
139-264 |
| superfamily |
SSF52821 |
Rhodanese/Cell |
1.5e-06 |
143-259 |
| no_ID |
|
| HMMPanther |
PTHR11177 |
CHITINASE |
8.6e-188 |
1-456 |
| HMMPanther |
PTHR11177:SF3 |
CHITINASE |
8.6e-188 |
1-456 |
| Seg |
seg |
seg |
NA |
113-129 |
- Wolf-PSORT
Lj3g3v2437560.1 plas 7, chlo 2, cyto 2, vacu 1, E.R. 1, pero 1, cyto_nucl 1, chlo_mito 1, E.R._vacu 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj3g3v2437560.1 |
|