Miyakogusa Predicted Gene
- Lj3g3v2415310.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr3
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1JRY6_SOYBN |
568 |
80.0 |
88.4 |
(tr|I1JRY6) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT2G46370.4 |
468 |
64.9 |
79.4 |
| Symbols: JAR1 | Auxin-responsive GH3 family protein | chr2:19034233-19036369 FORWARD LENGTH=586 |
| Medicago |
Medtr7g117110.1 |
565 |
79.4 |
88.1 |
| indole-3-acetic acid-amido synthetase | HC | chr7:48364722-48370468 | 20130731 |
| Soybean |
Glyma03g41700.2 |
568 |
80.0 |
88.4 |
|
| LJGI |
gnl|LJGI|TC80185 |
2016 |
100.0 |
100.0 |
similar to UniRef100_A1BNG5 Cluster: Jasmonic acid-amino acid-conjugating enzyme; n=1; Nicotiana attenuata|Rep: Jasmonic acid-amino acid-conjugating enzyme - Nicotiana attenuata, partial (63%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj3g3v2415310.1 |
length: 339 aa. |
| IPR004993 |
GH3 auxin-responsive promoter |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF03321 |
GH3 |
1.2e-93 |
17-339 |
| no_ID |
|
| Coil |
coil |
coiled-coil |
NA |
15-36 |
| HMMPanther |
PTHR31901 |
FAMILY |
1.1e-140 |
1-339 |
| HMMPanther |
PTHR31901:SF0 |
SUBFAMILY |
1.1e-140 |
1-339 |
| Seg |
seg |
seg |
NA |
156-168 |
- Wolf-PSORT
Lj3g3v2415310.1 cyto 10, nucl 2, plas 1, pero 1, cysk_nucl 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj3g3v2415310.1 |
|