Miyakogusa Predicted Gene

Lj3g3v2414270.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1KHX9_SOYBN 1463 70.9 81.2 (tr|I1KHX9) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT2G46340.1 771 46.2 61.6 | Symbols: SPA1 | SPA (suppressor of phyA-105) protein family | chr2:19022572-19026821 REVERSE LENGTH=1029
Medicago Medtr8g027985.1 1264 62.4 72.3 | ubiquitin ligase cop1, putative | HC | chr8:10311061-10316451 | 20130731
Soybean Glyma07g06420.1 1463 70.9 81.2  
LJGI gnl|LJGI|GO013554 412 97.3 97.3  
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v2414270.1 length: 1048 aa.
IPR000719 Protein kinase, catalytic domain
method AccNumber shortName E-value location
Molecular Function GO:0004672 protein kinase activity    
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006468 protein phosphorylation    
HMMPfam PF00069 Pkinase 1.5e-08 447-536
ProfileScan PS50011 PROTEIN_KINASE_DOM 11.581 176-536
IPR001680 WD40 repeat
Molecular Function GO:0005515 protein binding    
HMMPfam PF00400 WD40 7e-06 784-812
817-855
905-939
HMMSmart SM00320 WD40 54 727-762
773-812
815-855
858-897
901-939
950-989
1000-1046
ProfileScan PS50082 WD_REPEATS_2 11.879 779-821
822-864
908-948
IPR002290 Serine/threonine- / dual specificity protein kinase, catalytic domain
Molecular Function GO:0004672 protein kinase activity    
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006468 protein phosphorylation    
HMMSmart SM00220 Serine/Threonine 2.1e-05 190-536
IPR011009 Protein kinase-like domain
Molecular Function GO:0016772 transferase activity, transferring phosphorus-containing groups    
superfamily SSF56112 Protein 2.7e-17 277-567
IPR015943 WD40/YVTN repeat-like-containing domain
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:2.130.10.10 no description 1.2e-51 732-1046
IPR017986 WD40-repeat-containing domain
Molecular Function GO:0005515 protein binding    
ProfileScan PS50294 WD_REPEATS_REGION 24.389 730-948
superfamily SSF50978 WD40 4.3e-49 734-1046
IPR019775 WD40 repeat, conserved site
PatternScan PS00678 WD_REPEATS_1 NA 799-813
926-940
IPR020472 G-protein beta WD-40 repeat
FPrintScan PR00320 GPROTEINBRPT 2.9e-05 799-813
842-856
926-940
no_ID  
Coil coil coiled-coil NA 569-597
Gene3D G3DSA:1.10.510.10 no description 3.5e-21 414-575
HMMPanther PTHR22847 WD40 1.1e-197 406-1047
HMMPanther PTHR22847:SF14 UBIQUITIN 1.1e-197 406-1047
Seg seg seg NA 568-583
765-773
Wolf-PSORT
Lj3g3v2414270.1	nucl 13
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v2414270.1