Miyakogusa Predicted Gene

Lj3g3v2387590.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1KHZ7_SOYBN 572 75.8 84.3 (tr|I1KHZ7) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT3G07550.2 407 56.2 74.0 | Symbols: | RNI-like superfamily protein | chr3:2409946-2411133 FORWARD LENGTH=395
Medicago Medtr8g028140.1 559 76.0 86.1 | F-box/LRR protein | HC | chr8:10472875-10471688 | 20130731
Soybean Glyma07g06600.1 572 75.8 84.3  
LJGI gnl|LJGI|TC63994 1271 99.8 99.8 weakly similar to UniRef100_A7QYJ1 Cluster: Chromosome undetermined scaffold_248, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_248, whole genome shotgun sequence - Vitis vinifera (Grape), partial (33%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v2387590.1 length: 376 aa.
IPR001611 Leucine-rich repeat
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00560 LRR_1 0.075 332-353
IPR006553 Leucine-rich repeat, cysteine-containing subtype
HMMSmart SM00367 Leucine-rich 11 75-100
101-126
127-152
153-178
179-204
252-277
304-329
330-355
no_ID  
Gene3D G3DSA:3.80.10.10 no description 1.1e-17 2-225
232-354
HMMPanther PTHR23125 F-BOX/LEUCINE 1.5e-142 1-369
HMMPanther PTHR23125:SF38 GB 1.5e-142 1-369
HMMPfam PF13516 LRR_6 1.1 127-151
155-175
304-326
Seg seg seg NA 64-78
superfamily SSF52047 RNI-like 1e-38 68-354
Wolf-PSORT
Lj3g3v2387590.1	cyto 7, nucl 4, cyto_plas 4
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v2387590.1