Miyakogusa Predicted Gene

Lj3g3v2385360.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr3

Full length sequence(45610869 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL Q68AN1_PSOTE 482 69.6 77.4 (tr|Q68AN1) BZip transcription factor OS=Psophocarpus tetragonolobus GN=WBR2 PE=2 SV=1

TAIR_pep AT2G46270.1 253 46.3 58.1 | Symbols: GBF3 | G-box binding factor 3 | chr2:19000859-19002901 FORWARD LENGTH=382

Medicago Medtr8g028150.1 475 69.9 78.0 | bZIP transcription factor family protein | HC | chr8:10492845-10487475 | 20130731

Soybean Glyma16g03190.1 472 69.6 76.5

LJGI gnl|LJGI|FS324944 922 100.0 100.0 similar to UniRef100_Q41109 Cluster: Regulator of MAT2; n=1; Phaseolus vulgaris|Rep: Regulator of MAT2 - Phaseolus vulgaris (Kidney bean) (French bean), partial (35%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj3g3v2385360.1 length: 355 aa.

IPR004827 Basic-leucine zipper domain

method AccNumber shortName E-value location

Molecular Function GO:0003700 sequence-specific DNA binding transcription factor activity

Biological Process GO:0006355 regulation of transcription, DNA-dependent

Molecular Function GO:0043565 sequence-specific DNA binding

HMMPfam PF00170 bZIP_1 1.7e-18 279-341

HMMSmart SM00338 basic 4.7e-18 279-343

PatternScan PS00036 BZIP_BASIC NA 286-301

ProfileScan PS50217 BZIP 12.967 281-344

IPR012900 G-box binding, MFMR

Molecular Function GO:0003677 DNA binding

Cellular Component GO:0005634 nucleus

Biological Process GO:0006351 transcription, DNA-dependent

Biological Process GO:0006355 regulation of transcription, DNA-dependent

HMMPfam PF07777 MFMR 3.7e-64 1-185

no_ID

Coil coil coiled-coil NA 299-348

Gene3D G3DSA:1.20.5.170 no description 3e-14 273-338

HMMPanther PTHR22952 CAMP-RESPONSE 7.2e-71 37-341

HMMPanther PTHR22952:SF52 OS01G0279900 7.2e-71 37-341

Seg seg seg NA 65-84
173-181

Wolf-PSORT

Lj3g3v2385360.1 nucl 14

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj3g3v2385360.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	Q68AN1_PSOTE	482	69.6	77.4	(tr\|Q68AN1) BZip transcription factor OS=Psophocarpus tetragonolobus GN=WBR2 PE=2 SV=1
TAIR_pep	AT2G46270.1	253	46.3	58.1	\| Symbols: GBF3 \| G-box binding factor 3 \| chr2:19000859-19002901 FORWARD LENGTH=382
Medicago	Medtr8g028150.1	475	69.9	78.0	\| bZIP transcription factor family protein \| HC \| chr8:10492845-10487475 \| 20130731
Soybean	Glyma16g03190.1	472	69.6	76.5
LJGI	gnl\|LJGI\|FS324944	922	100.0	100.0	similar to UniRef100_Q41109 Cluster: Regulator of MAT2; n=1; Phaseolus vulgaris\|Rep: Regulator of MAT2 - Phaseolus vulgaris (Kidney bean) (French bean), partial (35%)

IPR004827	Basic-leucine zipper domain
Lj3g3v2385360.1				length: 355 aa.
method	AccNumber	shortName	E-value	location
Molecular Function	GO:0003700	sequence-specific DNA binding transcription factor activity
Biological Process	GO:0006355	regulation of transcription, DNA-dependent
Molecular Function	GO:0043565	sequence-specific DNA binding
HMMPfam	PF00170	bZIP_1	1.7e-18	279-341
HMMSmart	SM00338	basic	4.7e-18	279-343
PatternScan	PS00036	BZIP_BASIC	NA	286-301
ProfileScan	PS50217	BZIP	12.967	281-344
IPR012900	G-box binding, MFMR
Molecular Function	GO:0003677	DNA binding
Cellular Component	GO:0005634	nucleus
Biological Process	GO:0006351	transcription, DNA-dependent
Biological Process	GO:0006355	regulation of transcription, DNA-dependent
HMMPfam	PF07777	MFMR	3.7e-64	1-185
no_ID
Coil	coil	coiled-coil	NA	299-348
Gene3D	G3DSA:1.20.5.170	no description	3e-14	273-338
HMMPanther	PTHR22952	CAMP-RESPONSE	7.2e-71	37-341
HMMPanther	PTHR22952:SF52	OS01G0279900	7.2e-71	37-341
Seg	seg	seg	NA	65-84 173-181