Miyakogusa Predicted Gene
- Lj3g3v2364160.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr3
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1NCH4_SOYBN |
638 |
80.1 |
90.0 |
(tr|I1NCH4) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT3G61600.1 |
621 |
76.4 |
89.0 |
| Symbols: ATPOB1, POB1 | POZ/BTB containin G-protein 1 | chr3:22795704-22797953 FORWARD LENGTH=561 |
| Medicago |
Medtr8g028190.2 |
619 |
78.0 |
87.7 |
| BTB/POZ domain protein POB1 | HC | chr8:10528628-10524338 | 20130731 |
| Soybean |
Glyma19g44170.1 |
638 |
80.1 |
90.0 |
|
| LJGI |
gnl|LJGI|TC68507 |
1082 |
100.0 |
100.0 |
similar to UniRef100_O82343 Cluster: Expressed protein; n=1; Arabidopsis thaliana|Rep: Expressed protein - Arabidopsis thaliana (Mouse-ear cress), partial (30%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj3g3v2364160.1 |
length: 382 aa. |
| IPR011333 |
BTB/POZ fold |
| method |
AccNumber |
shortName |
E-value |
location |
| Gene3D |
G3DSA:3.30.710.10 |
no description |
8.5e-09 |
4-66 |
| IPR011705 |
BTB/Kelch-associated |
| HMMPfam |
PF07707 |
BACK |
6.5e-12 |
91-184 |
| HMMSmart |
SM00875 |
BTB |
1.4e-08 |
83-185 |
| IPR013069 |
BTB/POZ |
| Molecular Function |
GO:0005515 |
protein binding |
|
|
| HMMPfam |
PF00651 |
BTB |
4.5e-06 |
5-65 |
| no_ID |
|
| HMMPanther |
PTHR24412 |
FAMILY |
5.6e-144 |
1-270 |
| HMMPanther |
PTHR24412:SF93 |
SUBFAMILY |
5.6e-144 |
1-270 |
- Wolf-PSORT
Lj3g3v2364160.1 cyto 5, mito 3, nucl 2.5, chlo_mito 2.5, cyto_pero 2.5, cyto_E.R. 2.5
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj3g3v2364160.1 |
|