| database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
|---|---|---|---|---|---|
| TrEMBL | I1MKV5_SOYBN | 1971 | 81.6 | 87.5 | (tr|I1MKV5) Uncharacterized protein OS=Glycine max PE=4 SV=2 |
| TAIR_pep | AT2G46020.2 | 1521 | 65.1 | 75.0 | | Symbols: CHR2, ATBRM, BRM, CHA2 | transcription regulatory protein SNF2, putative | chr2:18923304-18931769 FORWARD LENGTH=2193 |
| Medicago | Medtr8g030550.1 | 1881 | 78.4 | 84.7 | | ATP-dependent helicase BRM | HC | chr8:11279486-11267681 | 20130731 |
| Soybean | Glyma16g03950.1 | 1954 | 81.3 | 87.2 | |
| LJGI | gnl|LJGI|FS324888 | 1231 | 98.8 | 98.8 | similar to UniRef100_A2Q217 Cluster: HMG-I and HMG-Y, DNA-binding; Bromodomain; Helicase, C-terminal; n=1; Medicago truncatula|Rep: HMG-I and HMG-Y, DNA-binding; Bromodomain; Helicase, C-terminal - Medicago truncatula (Barrel medic), partial (14%) |
| Lj3g3v2341100.1 | length: 1186 aa. | |||
| IPR000330 | SNF2-related | |||
|---|---|---|---|---|
| method | AccNumber | shortName | E-value | location |
| Molecular Function | GO:0003677 | DNA binding | ||
| Molecular Function | GO:0005524 | ATP binding | ||
| HMMPfam | PF00176 | SNF2_N | 1.9e-57 | 4-266 |
| IPR001487 | Bromodomain | |||
| Molecular Function | GO:0005515 | protein binding | ||
| Gene3D | G3DSA:1.20.920.10 | no description | 4e-05 | 884-990 |
| HMMSmart | SM00297 | bromo | 2.5e-05 | 882-997 |
| superfamily | SSF47370 | Bromodomain | 5e-08 | 879-1000 |
| IPR001650 | Helicase, C-terminal | |||
| Molecular Function | GO:0003676 | nucleic acid binding | ||
| Molecular Function | GO:0004386 | helicase activity | ||
| Molecular Function | GO:0005524 | ATP binding | ||
| HMMPfam | PF00271 | Helicase_C | 2.2e-12 | 324-399 |
| HMMSmart | SM00490 | helicase | 1e-22 | 315-399 |
| ProfileScan | PS51194 | HELICASE_CTER | 17.400 | 289-466 |
| IPR014001 | Helicase, superfamily 1/2, ATP-binding domain | |||
| HMMSmart | SM00487 | DEAD-like | 0.0012 | 1-143 |
| ProfileScan | PS51192 | HELICASE_ATP_BIND_1 | 20.613 | 1-135 |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase | |||
| superfamily | SSF52540 | P-loop | 1.2e-57 | 191-529 4-188 |
| no_ID | ||||
| Coil | coil | coiled-coil | NA | 505-526 |
| Gene3D | G3DSA:3.40.50.300 | no description | 3.7e-21 | 8-131 280-422 |
| HMMPanther | PTHR10799 | SWI/SNF-RELATED | 0 | 1-1080 |
| HMMPanther | PTHR10799:SF276SUBFAMILY | NOT | 0 | 1-1080 |
| Seg | seg | seg | NA | 122-133 475-494 584-594 1119-1136 |
Lj3g3v2341100.1 nucl 12, cyto 1, cysk 1
| entry_id | prediction | score | sppta | spptna | fp | profile |
|---|---|---|---|---|---|---|
| Lj3g3v2341100.1 |