Miyakogusa Predicted Gene

Lj3g3v2320680.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7KRP3_MEDTR 725 72.0 83.3 (tr|G7KRP3) Pentatricopeptide repeat-containing protein OS=Medicago truncatula GN=MTR_7g090340 PE=4 SV=1
TAIR_pep AT4G26680.2 587 59.5 74.4 | Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr4:13454853-13456418 FORWARD LENGTH=521
Medicago Medtr7g090340.1 725 72.0 83.3 | PPR containing plant-like protein | HC | chr7:35534069-35535796 | 20130731
Soybean Glyma08g21280.2 686 69.8 81.1  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v2320680.1 length: 493 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.17 163-190
HMMPfam PF12854 PPR_1 4.1e-08 192-223
225-253
401-432
HMMPfam PF13041 PPR_2 7.5e-12 264-312
334-382
HMMPfam PF13812 PPR_3 0.14 445-473
HMMTigr TIGR00756 PPR: 2.2e-07 163-196
197-231
232-266
267-301
302-336
338-371
408-440
ProfileScan PS51375 PPR 8.791 72-106
125-159
160-194
195-229
265-299
230-264
300-334
335-369
370-404
405-439
440-474
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 2.5e-05 302-463
no_ID  
HMMPanther PTHR24015 FAMILY 1.2e-111 57-474
Wolf-PSORT
Lj3g3v2320680.1	chlo 5, nucl 4, chlo_mito 4
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v2320680.1