Miyakogusa Predicted Gene

Lj3g3v2320530.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1KV00_SOYBN 389 83.2 88.5 (tr|I1KV00) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT3G21350.1 295 63.8 72.8 | Symbols: MED6 | RNA polymerase transcriptional regulation mediator-related | chr3:7517106-7518587 FORWARD LENGTH=257
Medicago Medtr8g015230.1 387 80.1 83.3 | mediator of RNA polymerase II transcription subunit 6 | HC | chr8:4949326-4944273 | 20130731
Soybean Glyma08g21290.1 396 83.6 88.9  
LJGI gnl|LJGI|TC59984 1451 100.0 100.0 similar to UniRef100_A7P6Y6 Cluster: Chromosome chr9 scaffold_7, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr9 scaffold_7, whole genome shotgun sequence - Vitis vinifera (Grape), partial (91%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v2320530.1 length: 244 aa.
IPR007018 Mediator complex, subunit Med6
method AccNumber shortName E-value location
Molecular Function GO:0001104 RNA polymerase II transcription cofactor activity    
Biological Process GO:0006357 regulation of transcription from RNA polymerase II promoter    
Cellular Component GO:0016592 mediator complex    
HMMPanther PTHR13104 MED-6-RELATED 1.3e-79 7-244
HMMPfam PF04934 Med6 6.3e-40 24-149
IPR016820 Mediator complex, subunit Med6, metazoa/plant
Molecular Function GO:0001104 RNA polymerase II transcription cofactor activity    
Biological Process GO:0006357 regulation of transcription from RNA polymerase II promoter    
Cellular Component GO:0016592 mediator complex    
HMMPIR PIRSF023869 RNA 2.2e-110 1-244
no_ID  
Seg seg seg NA 198-213
Wolf-PSORT
Lj3g3v2320530.1	cyto 5, nucl 4, chlo 2, plas 1, extr 1, cysk 1, chlo_mito 1, cysk_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v2320530.1