Miyakogusa Predicted Gene

Lj3g3v2318240.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1KV14_SOYBN 1082 77.5 85.6 (tr|I1KV14) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT4G32850.10 835 59.3 70.9 | Symbols: nPAP | nuclear poly(a) polymerase | chr4:15850134-15854266 FORWARD LENGTH=745
Medicago Medtr8g014560.4 906 72.6 81.4 | poly(A) polymerase | HC | chr8:4593559-4588712 | 20130731
Soybean Glyma08g21440.1 1066 76.5 84.3  
LJGI gnl|LJGI|FS330741 151 92.0 92.0 similar to UniRef100_A7P724 Cluster: Chromosome chr9 scaffold_7, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr9 scaffold_7, whole genome shotgun sequence - Vitis vinifera (Grape), partial (22%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v2318240.2 length: 700 aa.
IPR002934 Nucleotidyl transferase domain
method AccNumber shortName E-value location
Molecular Function GO:0016779 nucleotidyltransferase activity    
HMMPfam PF01909 NTP_transf_2 4e-06 88-157
IPR007010 Poly(A) polymerase, RNA-binding domain
Molecular Function GO:0003723 RNA binding    
Molecular Function GO:0004652 polynucleotide adenylyltransferase activity    
Cellular Component GO:0005634 nucleus    
Biological Process GO:0043631 RNA polyadenylation    
Gene3D G3DSA:3.30.70.590 no description 3.7e-30 362-487
HMMPfam PF04926 PAP_RNA-bind 5.2e-32 362-495
IPR007012 Poly(A) polymerase, central domain
Molecular Function GO:0004652 polynucleotide adenylyltransferase activity    
Biological Process GO:0043631 RNA polyadenylation    
HMMPfam PF04928 PAP_central 1.7e-107 12-360
IPR011068 Nucleotidyltransferase, class I, C-terminal-like
Molecular Function GO:0003723 RNA binding    
Molecular Function GO:0016779 nucleotidyltransferase activity    
Biological Process GO:0031123 RNA 3'-end processing    
superfamily SSF55003 PAP/Archaeal 1.4e-38 360-487
IPR014492 Poly(A) polymerase
Molecular Function GO:0004652 polynucleotide adenylyltransferase activity    
Cellular Component GO:0005634 nucleus    
Biological Process GO:0043631 RNA polyadenylation    
HMMPIR PIRSF018425 Poly(A) 4.7e-293 1-598
no_ID  
Gene3D G3DSA:1.10.1410.10 no description 3.7e-86 155-360
HMMPanther PTHR10682 POLY(A) 0 10-530
HMMPanther PTHR10682:SF5 POLY(A) 0 10-530
superfamily SSF81301 Nucleotidyltransferase 5.5e-63 10-209
superfamily SSF81631 PAP/OAS1 1.3e-64 210-359
Wolf-PSORT
Lj3g3v2318240.2	nucl 11, cyto 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v2318240.2