Miyakogusa Predicted Gene
- Lj3g3v2317950.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr3
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1KV25_SOYBN |
482 |
63.9 |
75.8 |
(tr|I1KV25) Uncharacterized protein OS=Glycine max PE=4 SV=2 |
| TAIR_pep |
AT1G79760.1 |
135 |
32.7 |
45.2 |
| Symbols: DTA4 | downstream target of AGL15-4 | chr1:30012054-30013042 FORWARD LENGTH=299 |
| Medicago |
Medtr8g014330.1 |
464 |
61.4 |
74.9 |
| downstream target of agl15-4 protein | HC | chr8:4470176-4467246 | 20130731 |
| Soybean |
Glyma08g21550.1 |
483 |
63.9 |
75.8 |
|
| LJGI |
gnl|LJGI|TC71646 |
1568 |
100.0 |
100.0 |
weakly similar to UniRef100_A7P747 Cluster: Chromosome chr9 scaffold_7, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr9 scaffold_7, whole genome shotgun sequence - Vitis vinifera (Grape), partial (38%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj3g3v2317950.1 |
length: 368 aa. |
| IPR026992 |
Non-haem dioxygenase N-terminal domain |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF14226 |
DIOX_N |
6.9e-10 |
60-155 |
| IPR027443 |
Isopenicillin N synthase-like |
| Gene3D |
G3DSA:2.60.120.330 |
no description |
6.9e-24 |
50-331 |
| no_ID |
|
| Coil |
coil |
coiled-coil |
NA |
171-192 |
| Seg |
seg |
seg |
NA |
132-151 |
| superfamily |
SSF51197 |
Clavaminate |
5e-22 |
57-341 |
- Wolf-PSORT
Lj3g3v2317950.1 cyto 7, nucl 2, E.R. 2, chlo 1, vacu 1, golg 1, cysk_nucl 1, nucl_plas 1, E.R._plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj3g3v2317950.1 |
|