Miyakogusa Predicted Gene

Lj3g3v2315550.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7IH34_MEDTR 1585 90.5 94.5 (tr|G7IH34) Elongation factor EF-2 OS=Medicago truncatula GN=MTR_2g069320 PE=1 SV=1
TAIR_pep AT1G56070.1 1534 85.8 92.6 | Symbols: LOS1 | Ribosomal protein S5/Elongation factor G/III/V family protein | chr1:20968245-20971077 REVERSE LENGTH=843
Medicago Medtr2g069320.1 1585 90.5 94.5 | translation elongation factor EF-2 subunit | HC | chr2:28796997-28800462 | 20130731
Soybean Glyma08g18110.1 1565 87.8 93.5  
LJGI gnl|LJGI|TC75757 1211 81.6 81.6 homologue to UniRef100_Q9SGT4 Cluster: Elongation factor EF-2; n=1; Arabidopsis thaliana|Rep: Elongation factor EF-2 - Arabidopsis thaliana (Mouse-ear cress), complete
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v2315550.1 length: 843 aa.
IPR000640 Translation elongation factor EFG, V domain
method AccNumber shortName E-value location
Gene3D G3DSA:3.30.70.240 no description 7.8e-42 726-829
HMMPfam PF00679 EFG_C 1.4e-19 724-811
HMMSmart SM00838 Elongation 6.8e-18 724-813
IPR000795 Elongation factor, GTP-binding domain
Molecular Function GO:0003924 GTPase activity    
Molecular Function GO:0005525 GTP binding    
FPrintScan PR00315 ELONGATNFCT 4e-14 21-34
65-73
101-111
117-128
153-162
HMMPfam PF00009 GTP_EFTU 3.8e-60 17-341
PatternScan PS00301 EFACTOR_GTP NA 58-73
IPR004161 Translation elongation factor EFTu/EF1A, domain 2
Molecular Function GO:0005525 GTP binding    
HMMPfam PF03144 GTP_EFTU_D2 9.4e-14 393-468
IPR005225 Small GTP-binding protein domain
Molecular Function GO:0005525 GTP binding    
HMMTigr TIGR00231 small_GTP: 1e-16 20-169
IPR005517 Translation elongation factor EFG/EF2, domain IV
Molecular Function GO:0005525 GTP binding    
HMMPfam PF03764 EFG_IV 8.8e-38 606-722
HMMSmart SM00889 Elongation 1.8e-26 605-722
IPR009000 Translation elongation/initiation factor/Ribosomal, beta-barrel
superfamily SSF50447 Translation 5.7e-42 342-479
IPR009022 Elongation factor G, III-V domain
superfamily SSF54980 EF-G 6.6e-19 727-843
482-561
IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup
Gene3D G3DSA:3.30.230.10 no description 8e-68 573-725
IPR020568 Ribosomal protein S5 domain 2-type fold
superfamily SSF54211 Ribosomal 3.4e-75 562-726
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 3.2e-110 3-341
no_ID  
Gene3D G3DSA:2.40.30.10 no description 7.5e-54 338-484
Gene3D G3DSA:3.30.70.870 no description 8.5e-22 486-560
Gene3D G3DSA:3.40.50.300 no description 2.4e-67 2-220
Gene3D G3DSA:3.90.1430.10 no description 6.7e-37 222-326
HMMPanther PTHR23115 TRANSLATION 0 1-843
HMMPanther PTHR23115:SF4 EUKARYOTIC 0 1-843
Seg seg seg NA 127-137
Wolf-PSORT
Lj3g3v2315550.1	cyto 8, chlo 3, nucl 2, chlo_mito 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v2315550.1