Miyakogusa Predicted Gene

Lj3g3v2310040.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL M5X0T9_PRUPE 287 99.3 99.3 (tr|M5X0T9) Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012246mg PE=4 SV=1
TAIR_pep AT5G02960.1 272 95.8 95.8 | Symbols: | Ribosomal protein S12/S23 family protein | chr5:693280-694396 REVERSE LENGTH=142
Medicago Medtr1g066860.1 285 99.3 99.3 | 40S ribosomal protein S23-1 | HC | chr1:28735501-28737426 | 20130731
Soybean Glyma19g36250.1 285 99.3 99.3  
LJGI gnl|LJGI|TC60420 856 100.0 100.0 UniRef100_P46297 Cluster: 40S ribosomal protein S23; n=1; Fragaria x ananassa|Rep: 40S ribosomal protein S23 - Fragaria ananassa (Strawberry), complete
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v2310040.1 length: 142 aa.
IPR005680 Ribosomal protein S23, eukaryotic/archaeal
method AccNumber shortName E-value location
Molecular Function GO:0003735 structural constituent of ribosome    
Biological Process GO:0006412 translation    
Cellular Component GO:0015935 small ribosomal subunit    
HMMTigr TIGR00982 S23_S12_E_A: 2.2e-53 6-141
IPR006032 Ribosomal protein S12/S23
Molecular Function GO:0003735 structural constituent of ribosome    
Cellular Component GO:0005622 intracellular    
Cellular Component GO:0005840 ribosome    
Biological Process GO:0006412 translation    
HMMPIR PIRSF002133 Ribosomal 4.3e-50 6-142
HMMPanther PTHR11652 30S 4e-97 1-142
HMMPfam PF00164 Ribosomal_S12 2.7e-41 9-141
PatternScan PS00055 RIBOSOMAL_S12 NA 59-66
IPR012340 Nucleic acid-binding, OB-fold
Gene3D G3DSA:2.40.50.140 no description 5e-34 20-140
superfamily SSF50249 Nucleic 2.8e-34 19-140
no_ID  
HMMPanther PTHR11652:SF2 40S 4e-97 1-142
Wolf-PSORT
Lj3g3v2310040.1	cyto 7, nucl 3, mito 2, chlo 1, golg 1, cyto_mito 1, mito_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v2310040.1 Not targeted -18.474 -1.565 -2.194 11.01% -14.715